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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LP053791.1 emblrelpat Sequence 3 from Patent EP2861059. 25787 bp synthetic construct QL-ELE-00-012 82 bp View
LP053792.1 emblrelpat Sequence 4 from Patent EP2861059. 22824 bp synthetic construct QL-ELE-00-012 82 bp View
LP053793.1 emblrelpat Sequence 5 from Patent EP2861059. 24809 bp synthetic construct QL-ELE-00-012 82 bp View
LP053794.1 emblrelpat Sequence 6 from Patent EP2861059. 26543 bp synthetic construct QL-ELE-00-012 82 bp View
LP053795.1 emblrelpat Sequence 7 from Patent EP2861059. 23760 bp synthetic construct QL-ELE-00-012 82 bp View
LP053796.1 emblrelpat Sequence 8 from Patent EP2861059. 11042 bp synthetic construct QL-ELE-00-012 82 bp View
LP053796.1 emblrelpat Sequence 8 from Patent EP2861059. 11042 bp synthetic construct QL-ELE-00-012 82 bp View
LP053796.1 emblrelpat Sequence 8 from Patent EP2861059. 11042 bp synthetic construct QL-ELE-00-012 82 bp View
LP053796.1 emblrelpat Sequence 8 from Patent EP2861059. 11042 bp synthetic construct QL-ELE-00-012 82 bp View
LP059333.1 emblrelpat Sequence 1 from Patent EP2846621. 12248 bp synthetic construct QL-ELE-00-012 82 bp View
LP059333.1 emblrelpat Sequence 1 from Patent EP2846621. 12248 bp synthetic construct QL-ELE-00-012 82 bp View
LP059336.1 emblrelpat Sequence 4 from Patent EP2846621. 11248 bp synthetic construct QL-ELE-00-012 82 bp View
LP059336.1 emblrelpat Sequence 4 from Patent EP2846621. 11248 bp synthetic construct QL-ELE-00-012 82 bp View
LP059344.1 emblrelpat Sequence 12 from Patent EP2846621. 2753 bp synthetic construct QL-ELE-00-012 82 bp View
LP059344.1 emblrelpat Sequence 12 from Patent EP2846621. 2753 bp synthetic construct QL-ELE-00-012 82 bp View
LP059358.1 emblrelpat Sequence 26 from Patent EP2846621. 11743 bp synthetic construct QL-ELE-00-012 82 bp View
LP059358.1 emblrelpat Sequence 26 from Patent EP2846621. 11743 bp synthetic construct QL-ELE-00-012 82 bp View
LP059359.1 emblrelpat Sequence 27 from Patent EP2846621. 12322 bp synthetic construct QL-ELE-00-012 82 bp View
LP059359.1 emblrelpat Sequence 27 from Patent EP2846621. 12322 bp synthetic construct QL-ELE-00-012 82 bp View
LP059360.1 emblrelpat Sequence 28 from Patent EP2846621. 11787 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.