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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC057565.1 nt Binary vector pMpGWB412 DNA, comple... 11866 bp Binary vector pMpGWB412 QL-ELE-00-012 82 bp View
LC057566.1 nt Binary vector pMpGWB413 DNA, comple... 13600 bp Binary vector pMpGWB413 QL-ELE-00-012 82 bp View
LC057566.1 nt Binary vector pMpGWB413 DNA, comple... 13600 bp Binary vector pMpGWB413 QL-ELE-00-012 82 bp View
LC057567.1 nt Binary vector pMpGWB414 DNA, comple... 12722 bp Binary vector pMpGWB414 QL-ELE-00-012 82 bp View
LC057567.1 nt Binary vector pMpGWB414 DNA, comple... 12722 bp Binary vector pMpGWB414 QL-ELE-00-012 82 bp View
LC057567.1 nt Binary vector pMpGWB414 DNA, comple... 12722 bp Binary vector pMpGWB414 QL-ELE-00-012 82 bp View
LC057568.1 nt Binary vector pMpGWB415 DNA, comple... 11743 bp Binary vector pMpGWB415 QL-ELE-00-012 82 bp View
LC057568.1 nt Binary vector pMpGWB415 DNA, comple... 11743 bp Binary vector pMpGWB415 QL-ELE-00-012 82 bp View
LC057569.1 nt Binary vector pMpGWB416 DNA, comple... 12454 bp Binary vector pMpGWB416 QL-ELE-00-012 82 bp View
LC057569.1 nt Binary vector pMpGWB416 DNA, comple... 12454 bp Binary vector pMpGWB416 QL-ELE-00-012 82 bp View
LC057570.1 nt Binary vector pMpGWB417 DNA, comple... 11035 bp Binary vector pMpGWB417 QL-ELE-00-012 82 bp View
LC057570.1 nt Binary vector pMpGWB417 DNA, comple... 11035 bp Binary vector pMpGWB417 QL-ELE-00-012 82 bp View
LC057571.1 nt Binary vector pMpGWB418 DNA, comple... 12769 bp Binary vector pMpGWB418 QL-ELE-00-012 82 bp View
LC057571.1 nt Binary vector pMpGWB418 DNA, comple... 12769 bp Binary vector pMpGWB418 QL-ELE-00-012 82 bp View
LC057572.1 nt Binary vector pMpGWB419 DNA, comple... 11891 bp Binary vector pMpGWB419 QL-ELE-00-012 82 bp View
LC057572.1 nt Binary vector pMpGWB419 DNA, comple... 11891 bp Binary vector pMpGWB419 QL-ELE-00-012 82 bp View
LC057572.1 nt Binary vector pMpGWB419 DNA, comple... 11891 bp Binary vector pMpGWB419 QL-ELE-00-012 82 bp View
LC057573.1 nt Binary vector pMpGWB420 DNA, comple... 11911 bp Binary vector pMpGWB420 QL-ELE-00-012 82 bp View
LC057573.1 nt Binary vector pMpGWB420 DNA, comple... 11911 bp Binary vector pMpGWB420 QL-ELE-00-012 82 bp View
LC057574.1 nt Binary vector pMpGWB421 DNA, comple... 13645 bp Binary vector pMpGWB421 QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.