European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC057548.1 nt Binary vector pMpGWB332 DNA, comple... 13373 bp Binary vector pMpGWB332 QL-ELE-00-012 82 bp View
LC057548.1 nt Binary vector pMpGWB332 DNA, comple... 13373 bp Binary vector pMpGWB332 QL-ELE-00-012 82 bp View
LC057549.1 nt Binary vector pMpGWB333 DNA, comple... 14093 bp Binary vector pMpGWB333 QL-ELE-00-012 82 bp View
LC057549.1 nt Binary vector pMpGWB333 DNA, comple... 14093 bp Binary vector pMpGWB333 QL-ELE-00-012 82 bp View
LC057550.1 nt Binary vector pMpGWB334 DNA, comple... 14243 bp Binary vector pMpGWB334 QL-ELE-00-012 82 bp View
LC057550.1 nt Binary vector pMpGWB334 DNA, comple... 14243 bp Binary vector pMpGWB334 QL-ELE-00-012 82 bp View
LC057551.1 nt Binary vector pMpGWB335 DNA, comple... 13696 bp Binary vector pMpGWB335 QL-ELE-00-012 82 bp View
LC057551.1 nt Binary vector pMpGWB335 DNA, comple... 13696 bp Binary vector pMpGWB335 QL-ELE-00-012 82 bp View
LC057551.1 nt Binary vector pMpGWB335 DNA, comple... 13696 bp Binary vector pMpGWB335 QL-ELE-00-012 82 bp View
LC057552.1 nt Binary vector pMpGWB336 DNA, comple... 14590 bp Binary vector pMpGWB336 QL-ELE-00-012 82 bp View
LC057552.1 nt Binary vector pMpGWB336 DNA, comple... 14590 bp Binary vector pMpGWB336 QL-ELE-00-012 82 bp View
LC057553.1 nt Binary vector pMpGWB400 DNA, comple... 9287 bp Binary vector pMpGWB400 QL-ELE-00-012 82 bp View
LC057553.1 nt Binary vector pMpGWB400 DNA, comple... 9287 bp Binary vector pMpGWB400 QL-ELE-00-012 82 bp View
LC057554.1 nt Binary vector pMpGWB401 DNA, comple... 10996 bp Binary vector pMpGWB401 QL-ELE-00-012 82 bp View
LC057554.1 nt Binary vector pMpGWB401 DNA, comple... 10996 bp Binary vector pMpGWB401 QL-ELE-00-012 82 bp View
LC057555.1 nt Binary vector pMpGWB402 DNA, comple... 11852 bp Binary vector pMpGWB402 QL-ELE-00-012 82 bp View
LC057555.1 nt Binary vector pMpGWB402 DNA, comple... 11852 bp Binary vector pMpGWB402 QL-ELE-00-012 82 bp View
LC057555.1 nt Binary vector pMpGWB402 DNA, comple... 11852 bp Binary vector pMpGWB402 QL-ELE-00-012 82 bp View
LC057556.1 nt Binary vector pMpGWB403 DNA, comple... 12730 bp Binary vector pMpGWB403 QL-ELE-00-012 82 bp View
LC057556.1 nt Binary vector pMpGWB403 DNA, comple... 12730 bp Binary vector pMpGWB403 QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.