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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC057513.1 nt Binary vector pMpGWB234 DNA, comple... 12809 bp Binary vector pMpGWB234 QL-ELE-00-012 82 bp View
LC057514.1 nt Binary vector pMpGWB235 DNA, comple... 12262 bp Binary vector pMpGWB235 QL-ELE-00-012 82 bp View
LC057514.1 nt Binary vector pMpGWB235 DNA, comple... 12262 bp Binary vector pMpGWB235 QL-ELE-00-012 82 bp View
LC057514.1 nt Binary vector pMpGWB235 DNA, comple... 12262 bp Binary vector pMpGWB235 QL-ELE-00-012 82 bp View
LC057515.1 nt Binary vector pMpGWB236 DNA, comple... 13156 bp Binary vector pMpGWB236 QL-ELE-00-012 82 bp View
LC057515.1 nt Binary vector pMpGWB236 DNA, comple... 13156 bp Binary vector pMpGWB236 QL-ELE-00-012 82 bp View
LC057516.1 nt Binary vector pMpGWB300 DNA, comple... 10455 bp Binary vector pMpGWB300 QL-ELE-00-012 82 bp View
LC057516.1 nt Binary vector pMpGWB300 DNA, comple... 10455 bp Binary vector pMpGWB300 QL-ELE-00-012 82 bp View
LC057517.1 nt Binary vector pMpGWB301 DNA, comple... 12164 bp Binary vector pMpGWB301 QL-ELE-00-012 82 bp View
LC057517.1 nt Binary vector pMpGWB301 DNA, comple... 12164 bp Binary vector pMpGWB301 QL-ELE-00-012 82 bp View
LC057518.1 nt Binary vector pMpGWB302 DNA, comple... 13020 bp Binary vector pMpGWB302 QL-ELE-00-012 82 bp View
LC057518.1 nt Binary vector pMpGWB302 DNA, comple... 13020 bp Binary vector pMpGWB302 QL-ELE-00-012 82 bp View
LC057518.1 nt Binary vector pMpGWB302 DNA, comple... 13020 bp Binary vector pMpGWB302 QL-ELE-00-012 82 bp View
LC057519.1 nt Binary vector pMpGWB303 DNA, comple... 13898 bp Binary vector pMpGWB303 QL-ELE-00-012 82 bp View
LC057519.1 nt Binary vector pMpGWB303 DNA, comple... 13898 bp Binary vector pMpGWB303 QL-ELE-00-012 82 bp View
LC057520.1 nt Binary vector pMpGWB304 DNA, comple... 14060 bp Binary vector pMpGWB304 QL-ELE-00-012 82 bp View
LC057520.1 nt Binary vector pMpGWB304 DNA, comple... 14060 bp Binary vector pMpGWB304 QL-ELE-00-012 82 bp View
LC057521.1 nt Binary vector pMpGWB305 DNA, comple... 13739 bp Binary vector pMpGWB305 QL-ELE-00-012 82 bp View
LC057521.1 nt Binary vector pMpGWB305 DNA, comple... 13739 bp Binary vector pMpGWB305 QL-ELE-00-012 82 bp View
LC057521.1 nt Binary vector pMpGWB305 DNA, comple... 13739 bp Binary vector pMpGWB305 QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.