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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC057504.1 nt Binary vector pMpGWB225 DNA, comple... 13803 bp Binary vector pMpGWB225 QL-ELE-00-012 82 bp View
LC057505.1 nt Binary vector pMpGWB226 DNA, comple... 11447 bp Binary vector pMpGWB226 QL-ELE-00-012 82 bp View
LC057505.1 nt Binary vector pMpGWB226 DNA, comple... 11447 bp Binary vector pMpGWB226 QL-ELE-00-012 82 bp View
LC057506.1 nt Binary vector pMpGWB227 DNA, comple... 13181 bp Binary vector pMpGWB227 QL-ELE-00-012 82 bp View
LC057506.1 nt Binary vector pMpGWB227 DNA, comple... 13181 bp Binary vector pMpGWB227 QL-ELE-00-012 82 bp View
LC057507.1 nt Binary vector pMpGWB228 DNA, comple... 12303 bp Binary vector pMpGWB228 QL-ELE-00-012 82 bp View
LC057507.1 nt Binary vector pMpGWB228 DNA, comple... 12303 bp Binary vector pMpGWB228 QL-ELE-00-012 82 bp View
LC057507.1 nt Binary vector pMpGWB228 DNA, comple... 12303 bp Binary vector pMpGWB228 QL-ELE-00-012 82 bp View
LC057508.1 nt Binary vector pMpGWB229 DNA, comple... 12220 bp Binary vector pMpGWB229 QL-ELE-00-012 82 bp View
LC057508.1 nt Binary vector pMpGWB229 DNA, comple... 12220 bp Binary vector pMpGWB229 QL-ELE-00-012 82 bp View
LC057509.1 nt Binary vector pMpGWB230 DNA, comple... 13076 bp Binary vector pMpGWB230 QL-ELE-00-012 82 bp View
LC057509.1 nt Binary vector pMpGWB230 DNA, comple... 13076 bp Binary vector pMpGWB230 QL-ELE-00-012 82 bp View
LC057509.1 nt Binary vector pMpGWB230 DNA, comple... 13076 bp Binary vector pMpGWB230 QL-ELE-00-012 82 bp View
LC057510.1 nt Binary vector pMpGWB231 DNA, comple... 12479 bp Binary vector pMpGWB231 QL-ELE-00-012 82 bp View
LC057510.1 nt Binary vector pMpGWB231 DNA, comple... 12479 bp Binary vector pMpGWB231 QL-ELE-00-012 82 bp View
LC057511.1 nt Binary vector pMpGWB232 DNA, comple... 11939 bp Binary vector pMpGWB232 QL-ELE-00-012 82 bp View
LC057511.1 nt Binary vector pMpGWB232 DNA, comple... 11939 bp Binary vector pMpGWB232 QL-ELE-00-012 82 bp View
LC057512.1 nt Binary vector pMpGWB233 DNA, comple... 12659 bp Binary vector pMpGWB233 QL-ELE-00-012 82 bp View
LC057512.1 nt Binary vector pMpGWB233 DNA, comple... 12659 bp Binary vector pMpGWB233 QL-ELE-00-012 82 bp View
LC057513.1 nt Binary vector pMpGWB234 DNA, comple... 12809 bp Binary vector pMpGWB234 QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.