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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC057487.1 nt Binary vector pMpGWB208 DNA, comple... 13243 bp Binary vector pMpGWB208 QL-ELE-00-012 82 bp View
LC057487.1 nt Binary vector pMpGWB208 DNA, comple... 13243 bp Binary vector pMpGWB208 QL-ELE-00-012 82 bp View
LC057488.1 nt Binary vector pMpGWB209 DNA, comple... 10793 bp Binary vector pMpGWB209 QL-ELE-00-012 82 bp View
LC057488.1 nt Binary vector pMpGWB209 DNA, comple... 10793 bp Binary vector pMpGWB209 QL-ELE-00-012 82 bp View
LC057489.1 nt Binary vector pMpGWB210 DNA, comple... 12527 bp Binary vector pMpGWB210 QL-ELE-00-012 82 bp View
LC057489.1 nt Binary vector pMpGWB210 DNA, comple... 12527 bp Binary vector pMpGWB210 QL-ELE-00-012 82 bp View
LC057490.1 nt Binary vector pMpGWB211 DNA, comple... 11649 bp Binary vector pMpGWB211 QL-ELE-00-012 82 bp View
LC057490.1 nt Binary vector pMpGWB211 DNA, comple... 11649 bp Binary vector pMpGWB211 QL-ELE-00-012 82 bp View
LC057490.1 nt Binary vector pMpGWB211 DNA, comple... 11649 bp Binary vector pMpGWB211 QL-ELE-00-012 82 bp View
LC057491.1 nt Binary vector pMpGWB212 DNA, comple... 11600 bp Binary vector pMpGWB212 QL-ELE-00-012 82 bp View
LC057491.1 nt Binary vector pMpGWB212 DNA, comple... 11600 bp Binary vector pMpGWB212 QL-ELE-00-012 82 bp View
LC057492.1 nt Binary vector pMpGWB213 DNA, comple... 13334 bp Binary vector pMpGWB213 QL-ELE-00-012 82 bp View
LC057492.1 nt Binary vector pMpGWB213 DNA, comple... 13334 bp Binary vector pMpGWB213 QL-ELE-00-012 82 bp View
LC057493.1 nt Binary vector pMpGWB214 DNA, comple... 12456 bp Binary vector pMpGWB214 QL-ELE-00-012 82 bp View
LC057493.1 nt Binary vector pMpGWB214 DNA, comple... 12456 bp Binary vector pMpGWB214 QL-ELE-00-012 82 bp View
LC057493.1 nt Binary vector pMpGWB214 DNA, comple... 12456 bp Binary vector pMpGWB214 QL-ELE-00-012 82 bp View
LC057494.1 nt Binary vector pMpGWB215 DNA, comple... 11477 bp Binary vector pMpGWB215 QL-ELE-00-012 82 bp View
LC057494.1 nt Binary vector pMpGWB215 DNA, comple... 11477 bp Binary vector pMpGWB215 QL-ELE-00-012 82 bp View
LC057495.1 nt Binary vector pMpGWB216 DNA, comple... 12188 bp Binary vector pMpGWB216 QL-ELE-00-012 82 bp View
LC057495.1 nt Binary vector pMpGWB216 DNA, comple... 12188 bp Binary vector pMpGWB216 QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.