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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC057470.1 nt Binary vector pMpGWB128 DNA, comple... 12784 bp Binary vector pMpGWB128 QL-ELE-00-012 82 bp View
LC057470.1 nt Binary vector pMpGWB128 DNA, comple... 12784 bp Binary vector pMpGWB128 QL-ELE-00-012 82 bp View
LC057470.1 nt Binary vector pMpGWB128 DNA, comple... 12784 bp Binary vector pMpGWB128 QL-ELE-00-012 82 bp View
LC057471.1 nt Binary vector pMpGWB129 DNA, comple... 12701 bp Binary vector pMpGWB129 QL-ELE-00-012 82 bp View
LC057471.1 nt Binary vector pMpGWB129 DNA, comple... 12701 bp Binary vector pMpGWB129 QL-ELE-00-012 82 bp View
LC057472.1 nt Binary vector pMpGWB130 DNA, comple... 13557 bp Binary vector pMpGWB130 QL-ELE-00-012 82 bp View
LC057472.1 nt Binary vector pMpGWB130 DNA, comple... 13557 bp Binary vector pMpGWB130 QL-ELE-00-012 82 bp View
LC057472.1 nt Binary vector pMpGWB130 DNA, comple... 13557 bp Binary vector pMpGWB130 QL-ELE-00-012 82 bp View
LC057473.1 nt Binary vector pMpGWB131 DNA, comple... 12960 bp Binary vector pMpGWB131 QL-ELE-00-012 82 bp View
LC057473.1 nt Binary vector pMpGWB131 DNA, comple... 12960 bp Binary vector pMpGWB131 QL-ELE-00-012 82 bp View
LC057474.1 nt Binary vector pMpGWB132 DNA, comple... 12420 bp Binary vector pMpGWB132 QL-ELE-00-012 82 bp View
LC057474.1 nt Binary vector pMpGWB132 DNA, comple... 12420 bp Binary vector pMpGWB132 QL-ELE-00-012 82 bp View
LC057475.1 nt Binary vector pMpGWB133 DNA, comple... 13140 bp Binary vector pMpGWB133 QL-ELE-00-012 82 bp View
LC057475.1 nt Binary vector pMpGWB133 DNA, comple... 13140 bp Binary vector pMpGWB133 QL-ELE-00-012 82 bp View
LC057476.1 nt Binary vector pMpGWB134 DNA, comple... 13290 bp Binary vector pMpGWB134 QL-ELE-00-012 82 bp View
LC057476.1 nt Binary vector pMpGWB134 DNA, comple... 13290 bp Binary vector pMpGWB134 QL-ELE-00-012 82 bp View
LC057477.1 nt Binary vector pMpGWB135 DNA, comple... 12743 bp Binary vector pMpGWB135 QL-ELE-00-012 82 bp View
LC057477.1 nt Binary vector pMpGWB135 DNA, comple... 12743 bp Binary vector pMpGWB135 QL-ELE-00-012 82 bp View
LC057477.1 nt Binary vector pMpGWB135 DNA, comple... 12743 bp Binary vector pMpGWB135 QL-ELE-00-012 82 bp View
LC057478.1 nt Binary vector pMpGWB136 DNA, comple... 13637 bp Binary vector pMpGWB136 QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.