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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC057444.1 nt Binary vector pMpGWB102 DNA, comple... 12067 bp Binary vector pMpGWB102 QL-ELE-00-012 82 bp View
LC057444.1 nt Binary vector pMpGWB102 DNA, comple... 12067 bp Binary vector pMpGWB102 QL-ELE-00-012 82 bp View
LC057444.1 nt Binary vector pMpGWB102 DNA, comple... 12067 bp Binary vector pMpGWB102 QL-ELE-00-012 82 bp View
LC057445.1 nt Binary vector pMpGWB103 DNA, comple... 12945 bp Binary vector pMpGWB103 QL-ELE-00-012 82 bp View
LC057445.1 nt Binary vector pMpGWB103 DNA, comple... 12945 bp Binary vector pMpGWB103 QL-ELE-00-012 82 bp View
LC057446.1 nt Binary vector pMpGWB104 DNA, comple... 13107 bp Binary vector pMpGWB104 QL-ELE-00-012 82 bp View
LC057446.1 nt Binary vector pMpGWB104 DNA, comple... 13107 bp Binary vector pMpGWB104 QL-ELE-00-012 82 bp View
LC057447.1 nt Binary vector pMpGWB105 DNA, comple... 12786 bp Binary vector pMpGWB105 QL-ELE-00-012 82 bp View
LC057447.1 nt Binary vector pMpGWB105 DNA, comple... 12786 bp Binary vector pMpGWB105 QL-ELE-00-012 82 bp View
LC057447.1 nt Binary vector pMpGWB105 DNA, comple... 12786 bp Binary vector pMpGWB105 QL-ELE-00-012 82 bp View
LC057448.1 nt Binary vector pMpGWB106 DNA, comple... 12787 bp Binary vector pMpGWB106 QL-ELE-00-012 82 bp View
LC057448.1 nt Binary vector pMpGWB106 DNA, comple... 12787 bp Binary vector pMpGWB106 QL-ELE-00-012 82 bp View
LC057448.1 nt Binary vector pMpGWB106 DNA, comple... 12787 bp Binary vector pMpGWB106 QL-ELE-00-012 82 bp View
LC057449.1 nt Binary vector pMpGWB107 DNA, comple... 11931 bp Binary vector pMpGWB107 QL-ELE-00-012 82 bp View
LC057449.1 nt Binary vector pMpGWB107 DNA, comple... 11931 bp Binary vector pMpGWB107 QL-ELE-00-012 82 bp View
LC057450.1 nt Binary vector pMpGWB108 DNA, comple... 13724 bp Binary vector pMpGWB108 QL-ELE-00-012 82 bp View
LC057450.1 nt Binary vector pMpGWB108 DNA, comple... 13724 bp Binary vector pMpGWB108 QL-ELE-00-012 82 bp View
LC057451.1 nt Binary vector pMpGWB109 DNA, comple... 11274 bp Binary vector pMpGWB109 QL-ELE-00-012 82 bp View
LC057451.1 nt Binary vector pMpGWB109 DNA, comple... 11274 bp Binary vector pMpGWB109 QL-ELE-00-012 82 bp View
LC057452.1 nt Binary vector pMpGWB110 DNA, comple... 13008 bp Binary vector pMpGWB110 QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.