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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
KH774974.1 emblrelpat Sequence 17 from patent US 9670497. 743 bp unidentified QL-ELE-00-012 82 bp View
KH774978.1 emblrelpat Sequence 21 from patent US 9670497. 1400 bp unidentified QL-ELE-00-012 82 bp View
KH774979.1 emblrelpat Sequence 22 from patent US 9670497. 351 bp unidentified QL-ELE-00-012 82 bp View
KH774980.1 emblrelpat Sequence 23 from patent US 9670497. 815 bp unidentified QL-ELE-00-012 82 bp View
KH774980.1 emblrelpat Sequence 23 from patent US 9670497. 815 bp unidentified QL-ELE-00-012 82 bp View
KH776895.1 emblrelpat Sequence 2825 from patent US 9670501. 877 bp unidentified QL-ELE-00-012 82 bp View
KH839007.1 emblrelpat Sequence 11 from patent US 9683242. 4076 bp unidentified QL-ELE-00-012 82 bp View
KH850390.1 emblrelpat Sequence 820 from patent US 9695439. 2719 bp unidentified QL-ELE-00-012 82 bp View
KH850390.1 emblrelpat Sequence 820 from patent US 9695439. 2719 bp unidentified QL-ELE-00-012 82 bp View
KH850391.1 emblrelpat Sequence 821 from patent US 9695439. 2367 bp unidentified QL-ELE-00-012 82 bp View
KH850391.1 emblrelpat Sequence 821 from patent US 9695439. 2367 bp unidentified QL-ELE-00-012 82 bp View
KH919871.1 emblrelpat Sequence 5 from patent US 9706724. 545 bp unidentified QL-ELE-00-012 82 bp View
KH932591.1 emblrelpat Sequence 1 from patent US 9708620. 2767 bp unidentified QL-ELE-00-012 82 bp View
KH932591.1 emblrelpat Sequence 1 from patent US 9708620. 2767 bp unidentified QL-ELE-00-012 82 bp View
KH939467.1 emblrelpat Sequence 777 from patent US 9714430. 877 bp unidentified QL-ELE-00-012 82 bp View
KH941689.1 emblrelpat Sequence 1 from patent US 9718759. 21527 bp unidentified QL-ELE-00-012 82 bp View
KH941690.1 emblrelpat Sequence 2 from patent US 9718759. 23512 bp unidentified QL-ELE-00-012 82 bp View
KH945084.1 emblrelpat Sequence 11 from patent US 9719102. 10651 bp unidentified QL-ELE-00-012 82 bp View
KH945088.1 emblrelpat Sequence 15 from patent US 9719102. 10642 bp unidentified QL-ELE-00-012 82 bp View
KH945091.1 emblrelpat Sequence 18 from patent US 9719102. 11042 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.