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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
KH720084.1 emblrelpat Sequence 62 from patent US 9617556. 8113 bp unidentified QL-ELE-00-012 82 bp View
KH720085.1 emblrelpat Sequence 63 from patent US 9617556. 5267 bp unidentified QL-ELE-00-012 82 bp View
KH720101.1 emblrelpat Sequence 85 from patent US 9617556. 14827 bp unidentified QL-ELE-00-012 82 bp View
KH720116.1 emblrelpat Sequence 100 from patent US 9617556. 9130 bp unidentified QL-ELE-00-012 82 bp View
KH724355.1 emblrelpat Sequence 841 from patent US 9631000. 877 bp unidentified QL-ELE-00-012 82 bp View
KH734322.1 emblrelpat Sequence 1095 from patent US 9637736. 614 bp unidentified QL-ELE-00-012 82 bp View
KH734322.1 emblrelpat Sequence 1095 from patent US 9637736. 614 bp unidentified QL-ELE-00-012 82 bp View
KH734323.1 emblrelpat Sequence 1096 from patent US 9637736. 623 bp unidentified QL-ELE-00-012 82 bp View
KH734323.1 emblrelpat Sequence 1096 from patent US 9637736. 623 bp unidentified QL-ELE-00-012 82 bp View
KH734330.1 emblrelpat Sequence 1104 from patent US 9637736. 1448 bp unidentified QL-ELE-00-012 82 bp View
KH734330.1 emblrelpat Sequence 1104 from patent US 9637736. 1448 bp unidentified QL-ELE-00-012 82 bp View
KH734331.1 emblrelpat Sequence 1105 from patent US 9637736. 1204 bp unidentified QL-ELE-00-012 82 bp View
KH734331.1 emblrelpat Sequence 1105 from patent US 9637736. 1204 bp unidentified QL-ELE-00-012 82 bp View
KH734332.1 emblrelpat Sequence 1106 from patent US 9637736. 675 bp unidentified QL-ELE-00-012 82 bp View
KH734332.1 emblrelpat Sequence 1106 from patent US 9637736. 675 bp unidentified QL-ELE-00-012 82 bp View
KH734337.1 emblrelpat Sequence 1112 from patent US 9637736. 612 bp unidentified QL-ELE-00-012 82 bp View
KH734337.1 emblrelpat Sequence 1112 from patent US 9637736. 612 bp unidentified QL-ELE-00-012 82 bp View
KH734341.1 emblrelpat Sequence 1116 from patent US 9637736. 522 bp unidentified QL-ELE-00-012 82 bp View
KH734341.1 emblrelpat Sequence 1116 from patent US 9637736. 522 bp unidentified QL-ELE-00-012 82 bp View
KH734342.1 emblrelpat Sequence 1117 from patent US 9637736. 608 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.