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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
KH719993.1 emblrelpat Sequence 36 from patent US 9617553. 2966 bp unidentified QL-ELE-00-012 82 bp View
KH719993.1 emblrelpat Sequence 36 from patent US 9617553. 2966 bp unidentified QL-ELE-00-012 82 bp View
KH719998.1 emblrelpat Sequence 41 from patent US 9617553. 1446 bp unidentified QL-ELE-00-012 82 bp View
KH719998.1 emblrelpat Sequence 41 from patent US 9617553. 1446 bp unidentified QL-ELE-00-012 82 bp View
KH720001.1 emblrelpat Sequence 44 from patent US 9617553. 675 bp unidentified QL-ELE-00-012 82 bp View
KH720001.1 emblrelpat Sequence 44 from patent US 9617553. 675 bp unidentified QL-ELE-00-012 82 bp View
KH720035.1 emblrelpat Sequence 1 from patent US 9617556. 18491 bp unidentified QL-ELE-00-012 82 bp View
KH720035.1 emblrelpat Sequence 1 from patent US 9617556. 18491 bp unidentified QL-ELE-00-012 82 bp View
KH720035.1 emblrelpat Sequence 1 from patent US 9617556. 18491 bp unidentified QL-ELE-00-012 82 bp View
KH720035.1 emblrelpat Sequence 1 from patent US 9617556. 18491 bp unidentified QL-ELE-00-012 82 bp View
KH720037.1 emblrelpat Sequence 3 from patent US 9617556. 7085 bp unidentified QL-ELE-00-012 82 bp View
KH720038.1 emblrelpat Sequence 4 from patent US 9617556. 5303 bp unidentified QL-ELE-00-012 82 bp View
KH720040.1 emblrelpat Sequence 6 from patent US 9617556. 6747 bp unidentified QL-ELE-00-012 82 bp View
KH720041.1 emblrelpat Sequence 7 from patent US 9617556. 8462 bp unidentified QL-ELE-00-012 82 bp View
KH720042.1 emblrelpat Sequence 8 from patent US 9617556. 13268 bp unidentified QL-ELE-00-012 82 bp View
KH720043.1 emblrelpat Sequence 9 from patent US 9617556. 16490 bp unidentified QL-ELE-00-012 82 bp View
KH720048.1 emblrelpat Sequence 14 from patent US 9617556. 15279 bp unidentified QL-ELE-00-012 82 bp View
KH720049.1 emblrelpat Sequence 15 from patent US 9617556. 17273 bp unidentified QL-ELE-00-012 82 bp View
KH720057.1 emblrelpat Sequence 23 from patent US 9617556. 9245 bp unidentified QL-ELE-00-012 82 bp View
KH720058.1 emblrelpat Sequence 24 from patent US 9617556. 15500 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.