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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
KH601247.1 emblrelpat Sequence 57 from patent US 9580723. 651 bp unidentified QL-ELE-00-012 82 bp View
KH601417.1 emblrelpat Sequence 16 from patent US 9580725. 11252 bp unidentified QL-ELE-00-012 82 bp View
KH601523.1 emblrelpat Sequence 42 from patent US 9580726. 3434 bp unidentified QL-ELE-00-012 82 bp View
KH601524.1 emblrelpat Sequence 43 from patent US 9580726. 3434 bp unidentified QL-ELE-00-012 82 bp View
KH656643.1 emblrelpat Sequence 23 from patent US 9587244. 4157 bp unidentified QL-ELE-00-012 82 bp View
KH656688.1 emblrelpat Sequence 79 from patent US 9587245. 4433 bp unidentified QL-ELE-00-012 82 bp View
KH656688.1 emblrelpat Sequence 79 from patent US 9587245. 4433 bp unidentified QL-ELE-00-012 82 bp View
KH656689.1 emblrelpat Sequence 80 from patent US 9587245. 819 bp unidentified QL-ELE-00-012 82 bp View
KH656689.1 emblrelpat Sequence 80 from patent US 9587245. 819 bp unidentified QL-ELE-00-012 82 bp View
KH687883.1 emblrelpat Sequence 3 from patent US 9593317. 6234 bp unidentified QL-ELE-00-012 82 bp View
KH687883.1 emblrelpat Sequence 3 from patent US 9593317. 6234 bp unidentified QL-ELE-00-012 82 bp View
KH687883.1 emblrelpat Sequence 3 from patent US 9593317. 6234 bp unidentified QL-ELE-00-012 82 bp View
KH687883.1 emblrelpat Sequence 3 from patent US 9593317. 6234 bp unidentified QL-ELE-00-012 82 bp View
KH687884.1 emblrelpat Sequence 6 from patent US 9593317. 4925 bp unidentified QL-ELE-00-012 82 bp View
KH689497.1 emblrelpat Sequence 8 from patent US 9593351. 2615 bp unidentified QL-ELE-00-012 82 bp View
KH689497.1 emblrelpat Sequence 8 from patent US 9593351. 2615 bp unidentified QL-ELE-00-012 82 bp View
KH698484.1 emblrelpat Sequence 32 from patent US 9598701. 11024 bp unidentified QL-ELE-00-012 82 bp View
KH698485.1 emblrelpat Sequence 33 from patent US 9598701. 10680 bp unidentified QL-ELE-00-012 82 bp View
KH698486.1 emblrelpat Sequence 34 from patent US 9598701. 11636 bp unidentified QL-ELE-00-012 82 bp View
KH698487.1 emblrelpat Sequence 35 from patent US 9598701. 11251 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.