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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
KH569267.1 emblrelpat Sequence 31 from patent US 9574204. 5303 bp unidentified QL-ELE-00-012 82 bp View
KH569268.1 emblrelpat Sequence 32 from patent US 9574204. 8725 bp unidentified QL-ELE-00-012 82 bp View
KH569269.1 emblrelpat Sequence 33 from patent US 9574204. 10629 bp unidentified QL-ELE-00-012 82 bp View
KH569270.1 emblrelpat Sequence 34 from patent US 9574204. 18587 bp unidentified QL-ELE-00-012 82 bp View
KH569301.1 emblrelpat Sequence 82 from patent US 9574204. 9062 bp unidentified QL-ELE-00-012 82 bp View
KH569302.1 emblrelpat Sequence 83 from patent US 9574204. 5267 bp unidentified QL-ELE-00-012 82 bp View
KH569308.1 emblrelpat Sequence 92 from patent US 9574204. 8151 bp unidentified QL-ELE-00-012 82 bp View
KH569312.1 emblrelpat Sequence 96 from patent US 9574204. 8135 bp unidentified QL-ELE-00-012 82 bp View
KH569323.1 emblrelpat Sequence 107 from patent US 9574204. 16081 bp unidentified QL-ELE-00-012 82 bp View
KH569375.1 emblrelpat Sequence 21 from patent US 9574207. 7049 bp unidentified QL-ELE-00-012 82 bp View
KH569379.1 emblrelpat Sequence 25 from patent US 9574207. 8138 bp unidentified QL-ELE-00-012 82 bp View
KH569380.1 emblrelpat Sequence 26 from patent US 9574207. 7085 bp unidentified QL-ELE-00-012 82 bp View
KH569381.1 emblrelpat Sequence 27 from patent US 9574207. 7085 bp unidentified QL-ELE-00-012 82 bp View
KH569385.1 emblrelpat Sequence 31 from patent US 9574207. 15114 bp unidentified QL-ELE-00-012 82 bp View
KH569386.1 emblrelpat Sequence 32 from patent US 9574207. 13268 bp unidentified QL-ELE-00-012 82 bp View
KH569387.1 emblrelpat Sequence 33 from patent US 9574207. 19604 bp unidentified QL-ELE-00-012 82 bp View
KH569388.1 emblrelpat Sequence 34 from patent US 9574207. 20082 bp unidentified QL-ELE-00-012 82 bp View
KH569400.1 emblrelpat Sequence 46 from patent US 9574207. 5267 bp unidentified QL-ELE-00-012 82 bp View
KH569401.1 emblrelpat Sequence 47 from patent US 9574207. 8643 bp unidentified QL-ELE-00-012 82 bp View
KH569402.1 emblrelpat Sequence 48 from patent US 9574207. 8720 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.