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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
KH569180.1 emblrelpat Sequence 4 from patent US 9574201. 6234 bp unidentified QL-ELE-00-012 82 bp View
KH569180.1 emblrelpat Sequence 4 from patent US 9574201. 6234 bp unidentified QL-ELE-00-012 82 bp View
KH569180.1 emblrelpat Sequence 4 from patent US 9574201. 6234 bp unidentified QL-ELE-00-012 82 bp View
KH569190.1 emblrelpat Sequence 17 from patent US 9574201. 4925 bp unidentified QL-ELE-00-012 82 bp View
KH569234.1 emblrelpat Sequence 11 from patent US 9574203. 7413 bp unidentified QL-ELE-00-012 82 bp View
KH569234.1 emblrelpat Sequence 11 from patent US 9574203. 7413 bp unidentified QL-ELE-00-012 82 bp View
KH569237.1 emblrelpat Sequence 1 from patent US 9574204. 18491 bp unidentified QL-ELE-00-012 82 bp View
KH569237.1 emblrelpat Sequence 1 from patent US 9574204. 18491 bp unidentified QL-ELE-00-012 82 bp View
KH569237.1 emblrelpat Sequence 1 from patent US 9574204. 18491 bp unidentified QL-ELE-00-012 82 bp View
KH569237.1 emblrelpat Sequence 1 from patent US 9574204. 18491 bp unidentified QL-ELE-00-012 82 bp View
KH569239.1 emblrelpat Sequence 3 from patent US 9574204. 7085 bp unidentified QL-ELE-00-012 82 bp View
KH569240.1 emblrelpat Sequence 4 from patent US 9574204. 5303 bp unidentified QL-ELE-00-012 82 bp View
KH569242.1 emblrelpat Sequence 6 from patent US 9574204. 6747 bp unidentified QL-ELE-00-012 82 bp View
KH569243.1 emblrelpat Sequence 7 from patent US 9574204. 8462 bp unidentified QL-ELE-00-012 82 bp View
KH569244.1 emblrelpat Sequence 8 from patent US 9574204. 13268 bp unidentified QL-ELE-00-012 82 bp View
KH569245.1 emblrelpat Sequence 9 from patent US 9574204. 16490 bp unidentified QL-ELE-00-012 82 bp View
KH569250.1 emblrelpat Sequence 14 from patent US 9574204. 16122 bp unidentified QL-ELE-00-012 82 bp View
KH569251.1 emblrelpat Sequence 15 from patent US 9574204. 18657 bp unidentified QL-ELE-00-012 82 bp View
KH569262.1 emblrelpat Sequence 26 from patent US 9574204. 5195 bp unidentified QL-ELE-00-012 82 bp View
KH569264.1 emblrelpat Sequence 28 from patent US 9574204. 4330 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.