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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
KH522531.1 emblrelpat Sequence 1 from patent US 9556102. 21527 bp unidentified QL-ELE-00-012 82 bp View
KH522532.1 emblrelpat Sequence 2 from patent US 9556102. 23512 bp unidentified QL-ELE-00-012 82 bp View
KH522533.1 emblrelpat Sequence 3 from patent US 9556102. 25787 bp unidentified QL-ELE-00-012 82 bp View
KH522534.1 emblrelpat Sequence 4 from patent US 9556102. 22824 bp unidentified QL-ELE-00-012 82 bp View
KH522535.1 emblrelpat Sequence 5 from patent US 9556102. 24809 bp unidentified QL-ELE-00-012 82 bp View
KH522536.1 emblrelpat Sequence 6 from patent US 9556102. 26543 bp unidentified QL-ELE-00-012 82 bp View
KH522537.1 emblrelpat Sequence 7 from patent US 9556102. 23760 bp unidentified QL-ELE-00-012 82 bp View
KH522538.1 emblrelpat Sequence 8 from patent US 9556102. 11042 bp unidentified QL-ELE-00-012 82 bp View
KH522538.1 emblrelpat Sequence 8 from patent US 9556102. 11042 bp unidentified QL-ELE-00-012 82 bp View
KH522538.1 emblrelpat Sequence 8 from patent US 9556102. 11042 bp unidentified QL-ELE-00-012 82 bp View
KH522538.1 emblrelpat Sequence 8 from patent US 9556102. 11042 bp unidentified QL-ELE-00-012 82 bp View
KH523579.1 emblrelpat Sequence 15 from patent US 9556421. 342 bp unidentified QL-ELE-00-012 82 bp View
KH523582.1 emblrelpat Sequence 18 from patent US 9556421. 4683 bp unidentified QL-ELE-00-012 82 bp View
KH526170.1 emblrelpat Sequence 71 from patent US 9556450. 16843 bp unidentified QL-ELE-00-012 82 bp View
KH526904.1 emblrelpat Sequence 5 from patent US 9556492. 7450 bp unidentified QL-ELE-00-012 82 bp View
KH526904.1 emblrelpat Sequence 5 from patent US 9556492. 7450 bp unidentified QL-ELE-00-012 82 bp View
KH534086.1 emblrelpat Sequence 13 from patent US 9562267. 6922 bp unidentified QL-ELE-00-012 82 bp View
KH534098.1 emblrelpat Sequence 25 from patent US 9562267. 8605 bp unidentified QL-ELE-00-012 82 bp View
KH568704.1 emblrelpat Sequence 8739 from patent US 9574200. 877 bp unidentified QL-ELE-00-012 82 bp View
KH569180.1 emblrelpat Sequence 4 from patent US 9574201. 6234 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.