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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
KH508405.1 emblrelpat Sequence 42 from patent US 9546378. 2101 bp unidentified QL-ELE-00-012 82 bp View
KH508406.1 emblrelpat Sequence 43 from patent US 9546378. 1873 bp unidentified QL-ELE-00-012 82 bp View
KH508406.1 emblrelpat Sequence 43 from patent US 9546378. 1873 bp unidentified QL-ELE-00-012 82 bp View
KH508417.1 emblrelpat Sequence 54 from patent US 9546378. 2101 bp unidentified QL-ELE-00-012 82 bp View
KH508417.1 emblrelpat Sequence 54 from patent US 9546378. 2101 bp unidentified QL-ELE-00-012 82 bp View
KH508418.1 emblrelpat Sequence 55 from patent US 9546378. 1873 bp unidentified QL-ELE-00-012 82 bp View
KH508418.1 emblrelpat Sequence 55 from patent US 9546378. 1873 bp unidentified QL-ELE-00-012 82 bp View
KH509464.1 emblrelpat Sequence 1 from patent US 9550718. 21527 bp unidentified QL-ELE-00-012 82 bp View
KH509465.1 emblrelpat Sequence 2 from patent US 9550718. 23512 bp unidentified QL-ELE-00-012 82 bp View
KH509466.1 emblrelpat Sequence 3 from patent US 9550718. 25787 bp unidentified QL-ELE-00-012 82 bp View
KH509467.1 emblrelpat Sequence 4 from patent US 9550718. 22824 bp unidentified QL-ELE-00-012 82 bp View
KH509468.1 emblrelpat Sequence 5 from patent US 9550718. 24809 bp unidentified QL-ELE-00-012 82 bp View
KH509469.1 emblrelpat Sequence 6 from patent US 9550718. 26543 bp unidentified QL-ELE-00-012 82 bp View
KH509470.1 emblrelpat Sequence 7 from patent US 9550718. 23760 bp unidentified QL-ELE-00-012 82 bp View
KH509471.1 emblrelpat Sequence 8 from patent US 9550718. 11042 bp unidentified QL-ELE-00-012 82 bp View
KH509471.1 emblrelpat Sequence 8 from patent US 9550718. 11042 bp unidentified QL-ELE-00-012 82 bp View
KH509471.1 emblrelpat Sequence 8 from patent US 9550718. 11042 bp unidentified QL-ELE-00-012 82 bp View
KH509471.1 emblrelpat Sequence 8 from patent US 9550718. 11042 bp unidentified QL-ELE-00-012 82 bp View
KH517345.1 emblrelpat Sequence 7728 from patent US 9551006. 781 bp unidentified QL-ELE-00-012 82 bp View
KH517346.1 emblrelpat Sequence 7729 from patent US 9551006. 877 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.