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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
KH426272.1 emblrelpat Sequence 416 from patent US 9512438. 10374 bp unidentified QL-ELE-00-012 82 bp View
KH496709.1 emblrelpat Sequence 25 from patent US 9534230. 11811 bp unidentified QL-ELE-00-012 82 bp View
KH496710.1 emblrelpat Sequence 26 from patent US 9534230. 11829 bp unidentified QL-ELE-00-012 82 bp View
KH496711.1 emblrelpat Sequence 27 from patent US 9534230. 12393 bp unidentified QL-ELE-00-012 82 bp View
KH496712.1 emblrelpat Sequence 28 from patent US 9534230. 12414 bp unidentified QL-ELE-00-012 82 bp View
KH496713.1 emblrelpat Sequence 29 from patent US 9534230. 12366 bp unidentified QL-ELE-00-012 82 bp View
KH496714.1 emblrelpat Sequence 30 from patent US 9534230. 12384 bp unidentified QL-ELE-00-012 82 bp View
KH496715.1 emblrelpat Sequence 31 from patent US 9534230. 12348 bp unidentified QL-ELE-00-012 82 bp View
KH496716.1 emblrelpat Sequence 32 from patent US 9534230. 12366 bp unidentified QL-ELE-00-012 82 bp View
KH496717.1 emblrelpat Sequence 33 from patent US 9534230. 13305 bp unidentified QL-ELE-00-012 82 bp View
KH496718.1 emblrelpat Sequence 34 from patent US 9534230. 13326 bp unidentified QL-ELE-00-012 82 bp View
KH508384.1 emblrelpat Sequence 20 from patent US 9546378. 1924 bp unidentified QL-ELE-00-012 82 bp View
KH508384.1 emblrelpat Sequence 20 from patent US 9546378. 1924 bp unidentified QL-ELE-00-012 82 bp View
KH508386.1 emblrelpat Sequence 22 from patent US 9546378. 2152 bp unidentified QL-ELE-00-012 82 bp View
KH508386.1 emblrelpat Sequence 22 from patent US 9546378. 2152 bp unidentified QL-ELE-00-012 82 bp View
KH508387.1 emblrelpat Sequence 23 from patent US 9546378. 2122 bp unidentified QL-ELE-00-012 82 bp View
KH508387.1 emblrelpat Sequence 23 from patent US 9546378. 2122 bp unidentified QL-ELE-00-012 82 bp View
KH508404.1 emblrelpat Sequence 40 from patent US 9546378. 1894 bp unidentified QL-ELE-00-012 82 bp View
KH508404.1 emblrelpat Sequence 40 from patent US 9546378. 1894 bp unidentified QL-ELE-00-012 82 bp View
KH508405.1 emblrelpat Sequence 42 from patent US 9546378. 2101 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.