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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
KH354265.1 emblrelpat Sequence 4196 from patent US 9487795. 877 bp unidentified QL-ELE-00-012 82 bp View
KH354280.1 emblrelpat Sequence 120 from patent US 9487796. 877 bp unidentified QL-ELE-00-012 82 bp View
KH355833.1 emblrelpat Sequence 81 from patent US 9492528. 2065 bp unidentified QL-ELE-00-012 82 bp View
KH355849.1 emblrelpat Sequence 97 from patent US 9492528. 3079 bp unidentified QL-ELE-00-012 82 bp View
KH355852.1 emblrelpat Sequence 100 from patent US 9492528. 3067 bp unidentified QL-ELE-00-012 82 bp View
KH355853.1 emblrelpat Sequence 101 from patent US 9492528. 3091 bp unidentified QL-ELE-00-012 82 bp View
KH355856.1 emblrelpat Sequence 104 from patent US 9492528. 3058 bp unidentified QL-ELE-00-012 82 bp View
KH355857.1 emblrelpat Sequence 105 from patent US 9492528. 3079 bp unidentified QL-ELE-00-012 82 bp View
KH355860.1 emblrelpat Sequence 108 from patent US 9492528. 3061 bp unidentified QL-ELE-00-012 82 bp View
KH355861.1 emblrelpat Sequence 109 from patent US 9492528. 3085 bp unidentified QL-ELE-00-012 82 bp View
KH355864.1 emblrelpat Sequence 112 from patent US 9492528. 3115 bp unidentified QL-ELE-00-012 82 bp View
KH355865.1 emblrelpat Sequence 113 from patent US 9492528. 3142 bp unidentified QL-ELE-00-012 82 bp View
KH355879.1 emblrelpat Sequence 127 from patent US 9492528. 3462 bp unidentified QL-ELE-00-012 82 bp View
KH355879.1 emblrelpat Sequence 127 from patent US 9492528. 3462 bp unidentified QL-ELE-00-012 82 bp View
KH355880.1 emblrelpat Sequence 129 from patent US 9492528. 747 bp unidentified QL-ELE-00-012 82 bp View
KH355880.1 emblrelpat Sequence 129 from patent US 9492528. 747 bp unidentified QL-ELE-00-012 82 bp View
KH355885.1 emblrelpat Sequence 134 from patent US 9492528. 3505 bp unidentified QL-ELE-00-012 82 bp View
KH355885.1 emblrelpat Sequence 134 from patent US 9492528. 3505 bp unidentified QL-ELE-00-012 82 bp View
KH355897.1 emblrelpat Sequence 146 from patent US 9492528. 3520 bp unidentified QL-ELE-00-012 82 bp View
KH355897.1 emblrelpat Sequence 146 from patent US 9492528. 3520 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.