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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
KH277892.1 emblrelpat Sequence 97 from patent US 9458470. 3079 bp unidentified QL-ELE-00-012 82 bp View
KH277895.1 emblrelpat Sequence 100 from patent US 9458470. 3067 bp unidentified QL-ELE-00-012 82 bp View
KH277896.1 emblrelpat Sequence 101 from patent US 9458470. 3091 bp unidentified QL-ELE-00-012 82 bp View
KH277899.1 emblrelpat Sequence 104 from patent US 9458470. 3058 bp unidentified QL-ELE-00-012 82 bp View
KH277900.1 emblrelpat Sequence 105 from patent US 9458470. 3079 bp unidentified QL-ELE-00-012 82 bp View
KH277903.1 emblrelpat Sequence 108 from patent US 9458470. 3061 bp unidentified QL-ELE-00-012 82 bp View
KH277904.1 emblrelpat Sequence 109 from patent US 9458470. 3085 bp unidentified QL-ELE-00-012 82 bp View
KH277907.1 emblrelpat Sequence 112 from patent US 9458470. 3115 bp unidentified QL-ELE-00-012 82 bp View
KH277908.1 emblrelpat Sequence 113 from patent US 9458470. 3142 bp unidentified QL-ELE-00-012 82 bp View
KH280594.1 emblrelpat Sequence 8 from patent US 9462805. 530 bp unidentified QL-ELE-00-012 82 bp View
KH282102.1 emblrelpat Sequence 8 from patent US 9464117. 530 bp unidentified QL-ELE-00-012 82 bp View
KH284955.1 emblrelpat Sequence 8 from patent US 9464304. 2615 bp unidentified QL-ELE-00-012 82 bp View
KH284955.1 emblrelpat Sequence 8 from patent US 9464304. 2615 bp unidentified QL-ELE-00-012 82 bp View
KH305977.1 emblrelpat Sequence 7 from patent US 9469880. 3000 bp unidentified QL-ELE-00-012 82 bp View
KH305977.1 emblrelpat Sequence 7 from patent US 9469880. 3000 bp unidentified QL-ELE-00-012 82 bp View
KH305979.1 emblrelpat Sequence 9 from patent US 9469880. 3132 bp unidentified QL-ELE-00-012 82 bp View
KH305979.1 emblrelpat Sequence 9 from patent US 9469880. 3132 bp unidentified QL-ELE-00-012 82 bp View
KH305980.1 emblrelpat Sequence 10 from patent US 9469880. 5744 bp unidentified QL-ELE-00-012 82 bp View
KH305980.1 emblrelpat Sequence 10 from patent US 9469880. 5744 bp unidentified QL-ELE-00-012 82 bp View
KH351733.1 emblrelpat Sequence 921 from patent US 9487793. 877 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.