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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
KH175048.1 emblrelpat Sequence 35 from patent US 9441240. 8208 bp unidentified QL-ELE-00-012 82 bp View
KH175048.1 emblrelpat Sequence 35 from patent US 9441240. 8208 bp unidentified QL-ELE-00-012 82 bp View
KH175048.1 emblrelpat Sequence 35 from patent US 9441240. 8208 bp unidentified QL-ELE-00-012 82 bp View
KH175049.1 emblrelpat Sequence 36 from patent US 9441240. 2632 bp unidentified QL-ELE-00-012 82 bp View
KH175049.1 emblrelpat Sequence 36 from patent US 9441240. 2632 bp unidentified QL-ELE-00-012 82 bp View
KH175057.1 emblrelpat Sequence 44 from patent US 9441240. 347 bp unidentified QL-ELE-00-012 82 bp View
KH182940.1 emblrelpat Sequence 20 from patent US 9447386. 11696 bp unidentified QL-ELE-00-012 82 bp View
KH182941.1 emblrelpat Sequence 21 from patent US 9447386. 10866 bp unidentified QL-ELE-00-012 82 bp View
KH183022.1 emblrelpat Sequence 178 from patent US 9447386. 7085 bp unidentified QL-ELE-00-012 82 bp View
KH183023.1 emblrelpat Sequence 179 from patent US 9447386. 8611 bp unidentified QL-ELE-00-012 82 bp View
KH183024.1 emblrelpat Sequence 180 from patent US 9447386. 8611 bp unidentified QL-ELE-00-012 82 bp View
KH183025.1 emblrelpat Sequence 181 from patent US 9447386. 8611 bp unidentified QL-ELE-00-012 82 bp View
KH183026.1 emblrelpat Sequence 182 from patent US 9447386. 8611 bp unidentified QL-ELE-00-012 82 bp View
KH183027.1 emblrelpat Sequence 183 from patent US 9447386. 8611 bp unidentified QL-ELE-00-012 82 bp View
KH197435.1 emblrelpat Sequence 22 from patent US 9447424. 8406 bp unidentified QL-ELE-00-012 82 bp View
KH197436.1 emblrelpat Sequence 23 from patent US 9447424. 8913 bp unidentified QL-ELE-00-012 82 bp View
KH197560.1 emblrelpat Sequence 209 from patent US 9447425. 574 bp unidentified QL-ELE-00-012 82 bp View
KH197560.1 emblrelpat Sequence 209 from patent US 9447425. 574 bp unidentified QL-ELE-00-012 82 bp View
KH197584.1 emblrelpat Sequence 233 from patent US 9447425. 4276 bp unidentified QL-ELE-00-012 82 bp View
KH277876.1 emblrelpat Sequence 81 from patent US 9458470. 2065 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.