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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN400381.1 nt Expression vector pMON108080, compl... 10566 bp Expression vector pMON108080 QL-ELE-00-012 82 bp View
JN400382.1 nt Expression vector pMON98939, comple... 10504 bp Expression vector pMON98939 QL-ELE-00-012 82 bp View
JN400382.1 nt Expression vector pMON98939, comple... 10504 bp Expression vector pMON98939 QL-ELE-00-012 82 bp View
JN400383.1 nt Expression vector pMON93914, comple... 11397 bp Expression vector pMON93914 QL-ELE-00-012 82 bp View
JN400383.1 nt Expression vector pMON93914, comple... 11397 bp Expression vector pMON93914 QL-ELE-00-012 82 bp View
JN400384.1 nt Expression vector pMON81312, comple... 10411 bp Expression vector pMON81312 QL-ELE-00-012 82 bp View
JN400384.1 nt Expression vector pMON81312, comple... 10411 bp Expression vector pMON81312 QL-ELE-00-012 82 bp View
JN400385.1 nt Expression vector pMON100407, compl... 9837 bp Expression vector pMON100407 QL-ELE-00-012 82 bp View
JN400385.1 nt Expression vector pMON100407, compl... 9837 bp Expression vector pMON100407 QL-ELE-00-012 82 bp View
JN400386.1 nt Expression vector pMON74532, comple... 9754 bp Expression vector pMON74532 QL-ELE-00-012 82 bp View
JN400386.1 nt Expression vector pMON74532, comple... 9754 bp Expression vector pMON74532 QL-ELE-00-012 82 bp View
JN400387.1 nt Expression vector pMON82053, comple... 9769 bp Expression vector pMON82053 QL-ELE-00-012 82 bp View
JN400387.1 nt Expression vector pMON82053, comple... 9769 bp Expression vector pMON82053 QL-ELE-00-012 82 bp View
JN570503.1 nt Cloning vector pEnEL2Omega-LUC, com... 5177 bp Cloning vector pEnEL2Omega-LUC QL-ELE-00-012 82 bp View
JN570503.1 nt Cloning vector pEnEL2Omega-LUC, com... 5177 bp Cloning vector pEnEL2Omega-LUC QL-ELE-00-012 82 bp View
JN593325.1 nt Binary vector pGPro4-35S, complete ... 8419 bp Binary vector pGPro4-35S QL-ELE-00-012 82 bp View
JN593325.1 nt Binary vector pGPro4-35S, complete ... 8419 bp Binary vector pGPro4-35S QL-ELE-00-012 82 bp View
JN811690.1 nt Plant transformation vector pCITCAM... 9297 bp Plant transformation vector pCITCAM101 QL-ELE-00-012 82 bp View
JN811690.1 nt Plant transformation vector pCITCAM... 9297 bp Plant transformation vector pCITCAM101 QL-ELE-00-012 82 bp View
JN811691.1 nt Plant transformation vector pC1300-... 10779 bp Plant transformation vector pC1300-EGFP QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.