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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
JE982229.1 emblrelpat Sequence 3 from Patent EP2865761. 7085 bp synthetic construct QL-ELE-00-012 82 bp View
JE982230.1 emblrelpat Sequence 4 from Patent EP2865761. 5303 bp synthetic construct QL-ELE-00-012 82 bp View
JE982232.1 emblrelpat Sequence 6 from Patent EP2865761. 6747 bp synthetic construct QL-ELE-00-012 82 bp View
JE982233.1 emblrelpat Sequence 7 from Patent EP2865761. 8462 bp synthetic construct QL-ELE-00-012 82 bp View
JE982234.1 emblrelpat Sequence 8 from Patent EP2865761. 13268 bp synthetic construct QL-ELE-00-012 82 bp View
JE982235.1 emblrelpat Sequence 9 from Patent EP2865761. 16490 bp synthetic construct QL-ELE-00-012 82 bp View
JE982240.1 emblrelpat Sequence 14 from Patent EP2865761. 15279 bp synthetic construct QL-ELE-00-012 82 bp View
JE982241.1 emblrelpat Sequence 15 from Patent EP2865761. 17273 bp synthetic construct QL-ELE-00-012 82 bp View
JE982249.1 emblrelpat Sequence 23 from Patent EP2865761. 9245 bp synthetic construct QL-ELE-00-012 82 bp View
JE982250.1 emblrelpat Sequence 24 from Patent EP2865761. 15500 bp synthetic construct QL-ELE-00-012 82 bp View
JE982288.1 emblrelpat Sequence 62 from Patent EP2865761. 8113 bp synthetic construct QL-ELE-00-012 82 bp View
JE982289.1 emblrelpat Sequence 63 from Patent EP2865761. 5267 bp synthetic construct QL-ELE-00-012 82 bp View
JE982311.1 emblrelpat Sequence 85 from Patent EP2865761. 14827 bp synthetic construct QL-ELE-00-012 82 bp View
JE982326.1 emblrelpat Sequence 100 from Patent EP2865761. 9130 bp synthetic construct QL-ELE-00-012 82 bp View
JE996906.1 emblrelpat Sequence 7 from Patent WO2015116680. 740 bp synthetic construct QL-ELE-00-012 82 bp View
JE996906.1 emblrelpat Sequence 7 from Patent WO2015116680. 740 bp synthetic construct QL-ELE-00-012 82 bp View
JF809616.1 nt Cauliflower mosaic virus isolate W2... 8041 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
JF909455.1 nt Cloning vector pPLV02, complete seq... 5069 bp Cloning vector pPLV02 QL-ELE-00-012 82 bp View
JF909456.1 nt Cloning vector pPLV03, complete seq... 5424 bp Cloning vector pPLV03 QL-ELE-00-012 82 bp View
JF909457.1 nt Cloning vector pPLV04, complete seq... 7269 bp Cloning vector pPLV04 QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.