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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
JD589724.1 emblrelpat Sequence 21 from Patent WO2015017510. 4747 bp synthetic construct QL-ELE-00-012 82 bp View
JD589725.1 emblrelpat Sequence 22 from Patent WO2015017510. 15646 bp synthetic construct QL-ELE-00-012 82 bp View
JD589726.1 emblrelpat Sequence 23 from Patent WO2015017510. 9644 bp synthetic construct QL-ELE-00-012 82 bp View
JD589728.1 emblrelpat Sequence 25 from Patent WO2015017510. 11611 bp synthetic construct QL-ELE-00-012 82 bp View
JD589740.1 emblrelpat Sequence 37 from Patent WO2015017510. 17261 bp synthetic construct QL-ELE-00-012 82 bp View
JD589741.1 emblrelpat Sequence 38 from Patent WO2015017510. 17234 bp synthetic construct QL-ELE-00-012 82 bp View
JD589756.1 emblrelpat Sequence 53 from Patent WO2015017510. 9266 bp synthetic construct QL-ELE-00-012 82 bp View
JD589779.1 emblrelpat Sequence 76 from Patent WO2015017510. 9979 bp synthetic construct QL-ELE-00-012 82 bp View
JD589780.1 emblrelpat Sequence 77 from Patent WO2015017510. 10513 bp synthetic construct QL-ELE-00-012 82 bp View
JD594763.1 emblrelpat Sequence 513 from Patent WO2015026886. 438 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
JD595317.1 emblrelpat Sequence 513 from Patent WO2015026883. 438 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
JD595867.1 emblrelpat Sequence 513 from Patent WO2015026887. 438 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
JE865222.1 emblrelpat Sequence 1546 from Patent EP2910638. 877 bp synthetic construct QL-ELE-00-012 82 bp View
JE958090.1 emblrelpat Sequence 1 from Patent EP2688903. 3067 bp synthetic construct QL-ELE-00-012 82 bp View
JE966389.1 emblrelpat Sequence 49 from Patent EP2861737. 500 bp synthetic construct QL-ELE-00-012 82 bp View
JE966418.1 emblrelpat Sequence 78 from Patent EP2861737. 3971 bp synthetic construct QL-ELE-00-012 82 bp View
JE966418.1 emblrelpat Sequence 78 from Patent EP2861737. 3971 bp synthetic construct QL-ELE-00-012 82 bp View
JE966957.1 emblrelpat Sequence 7 from Patent EP2864486. 10608 bp synthetic construct QL-ELE-00-012 82 bp View
JE972234.1 emblrelpat Sequence 1 from Patent EP2860254. 18491 bp synthetic construct QL-ELE-00-012 82 bp View
JE972234.1 emblrelpat Sequence 1 from Patent EP2860254. 18491 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.