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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
JC246121.1 emblrelpat Sequence 108 from Patent WO2013112523. 16042 bp synthetic construct QL-ELE-00-012 82 bp View
JC246122.1 emblrelpat Sequence 109 from Patent WO2013112523. 16042 bp synthetic construct QL-ELE-00-012 82 bp View
JC246123.1 emblrelpat Sequence 110 from Patent WO2013112523. 16042 bp synthetic construct QL-ELE-00-012 82 bp View
JC246124.1 emblrelpat Sequence 111 from Patent WO2013112523. 15657 bp synthetic construct QL-ELE-00-012 82 bp View
JC246125.1 emblrelpat Sequence 112 from Patent WO2013112523. 15657 bp synthetic construct QL-ELE-00-012 82 bp View
JC246126.1 emblrelpat Sequence 113 from Patent WO2013112523. 15657 bp synthetic construct QL-ELE-00-012 82 bp View
JC246127.1 emblrelpat Sequence 114 from Patent WO2013112523. 16042 bp synthetic construct QL-ELE-00-012 82 bp View
JC246128.1 emblrelpat Sequence 115 from Patent WO2013112523. 16042 bp synthetic construct QL-ELE-00-012 82 bp View
JC246129.1 emblrelpat Sequence 116 from Patent WO2013112523. 15657 bp synthetic construct QL-ELE-00-012 82 bp View
JC246130.1 emblrelpat Sequence 117 from Patent WO2013112523. 15657 bp synthetic construct QL-ELE-00-012 82 bp View
JC246131.1 emblrelpat Sequence 118 from Patent WO2013112523. 16042 bp synthetic construct QL-ELE-00-012 82 bp View
JC246132.1 emblrelpat Sequence 119 from Patent WO2013112523. 16042 bp synthetic construct QL-ELE-00-012 82 bp View
JC246133.1 emblrelpat Sequence 120 from Patent WO2013112523. 16042 bp synthetic construct QL-ELE-00-012 82 bp View
JC246134.1 emblrelpat Sequence 121 from Patent WO2013112523. 15657 bp synthetic construct QL-ELE-00-012 82 bp View
JC246135.1 emblrelpat Sequence 122 from Patent WO2013112523. 15657 bp synthetic construct QL-ELE-00-012 82 bp View
JC246136.1 emblrelpat Sequence 123 from Patent WO2013112523. 15657 bp synthetic construct QL-ELE-00-012 82 bp View
JC246168.1 emblrelpat Sequence 155 from Patent WO2013112523. 16632 bp synthetic construct QL-ELE-00-012 82 bp View
JC246170.1 emblrelpat Sequence 157 from Patent WO2013112523. 16632 bp synthetic construct QL-ELE-00-012 82 bp View
JC246172.1 emblrelpat Sequence 159 from Patent WO2013112523. 16632 bp synthetic construct QL-ELE-00-012 82 bp View
JC246174.1 emblrelpat Sequence 161 from Patent WO2013112523. 16632 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.