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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
JB866019.1 emblrelpat Sequence 333 from Patent EP2620501. 10303 bp synthetic construct QL-ELE-00-012 82 bp View
JB866029.1 emblrelpat Sequence 343 from Patent EP2620501. 11615 bp synthetic construct QL-ELE-00-012 82 bp View
JB866041.1 emblrelpat Sequence 355 from Patent EP2620501. 8791 bp synthetic construct QL-ELE-00-012 82 bp View
JB866046.1 emblrelpat Sequence 360 from Patent EP2620501. 8206 bp synthetic construct QL-ELE-00-012 82 bp View
JB866047.1 emblrelpat Sequence 361 from Patent EP2620501. 8602 bp synthetic construct QL-ELE-00-012 82 bp View
JB866050.1 emblrelpat Sequence 364 from Patent EP2620501. 8458 bp synthetic construct QL-ELE-00-012 82 bp View
JB866051.1 emblrelpat Sequence 365 from Patent EP2620501. 8386 bp synthetic construct QL-ELE-00-012 82 bp View
JB866052.1 emblrelpat Sequence 366 from Patent EP2620501. 9124 bp synthetic construct QL-ELE-00-012 82 bp View
JB866053.1 emblrelpat Sequence 367 from Patent EP2620501. 8791 bp synthetic construct QL-ELE-00-012 82 bp View
JB866054.1 emblrelpat Sequence 368 from Patent EP2620501. 8329 bp synthetic construct QL-ELE-00-012 82 bp View
JB866055.1 emblrelpat Sequence 369 from Patent EP2620501. 8206 bp synthetic construct QL-ELE-00-012 82 bp View
JB866056.1 emblrelpat Sequence 370 from Patent EP2620501. 8314 bp synthetic construct QL-ELE-00-012 82 bp View
JB866057.1 emblrelpat Sequence 371 from Patent EP2620501. 8137 bp synthetic construct QL-ELE-00-012 82 bp View
JB866058.1 emblrelpat Sequence 372 from Patent EP2620501. 8092 bp synthetic construct QL-ELE-00-012 82 bp View
JB866059.1 emblrelpat Sequence 373 from Patent EP2620501. 8602 bp synthetic construct QL-ELE-00-012 82 bp View
JB866060.1 emblrelpat Sequence 374 from Patent EP2620501. 8761 bp synthetic construct QL-ELE-00-012 82 bp View
JB866061.1 emblrelpat Sequence 375 from Patent EP2620501. 8674 bp synthetic construct QL-ELE-00-012 82 bp View
JB866082.1 emblrelpat Sequence 21 from Patent EP2620502. 7049 bp synthetic construct QL-ELE-00-012 82 bp View
JB866086.1 emblrelpat Sequence 25 from Patent EP2620502. 8138 bp synthetic construct QL-ELE-00-012 82 bp View
JB866087.1 emblrelpat Sequence 26 from Patent EP2620502. 7085 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.