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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
JB865785.1 emblrelpat Sequence 99 from Patent EP2620501. 8641 bp synthetic construct QL-ELE-00-012 82 bp View
JB865786.1 emblrelpat Sequence 100 from Patent EP2620501. 8641 bp synthetic construct QL-ELE-00-012 82 bp View
JB865787.1 emblrelpat Sequence 101 from Patent EP2620501. 11647 bp synthetic construct QL-ELE-00-012 82 bp View
JB865788.1 emblrelpat Sequence 102 from Patent EP2620501. 11611 bp synthetic construct QL-ELE-00-012 82 bp View
JB865789.1 emblrelpat Sequence 103 from Patent EP2620501. 11649 bp synthetic construct QL-ELE-00-012 82 bp View
JB865924.1 emblrelpat Sequence 238 from Patent EP2620501. 8457 bp synthetic construct QL-ELE-00-012 82 bp View
JB865928.1 emblrelpat Sequence 242 from Patent EP2620501. 8458 bp synthetic construct QL-ELE-00-012 82 bp View
JB865934.1 emblrelpat Sequence 248 from Patent EP2620501. 5303 bp synthetic construct QL-ELE-00-012 82 bp View
JB865935.1 emblrelpat Sequence 249 from Patent EP2620501. 9122 bp synthetic construct QL-ELE-00-012 82 bp View
JB865942.1 emblrelpat Sequence 256 from Patent EP2620501. 8091 bp synthetic construct QL-ELE-00-012 82 bp View
JB865946.1 emblrelpat Sequence 260 from Patent EP2620501. 8386 bp synthetic construct QL-ELE-00-012 82 bp View
JB865952.1 emblrelpat Sequence 266 from Patent EP2620501. 8137 bp synthetic construct QL-ELE-00-012 82 bp View
JB865959.1 emblrelpat Sequence 273 from Patent EP2620501. 8329 bp synthetic construct QL-ELE-00-012 82 bp View
JB865966.1 emblrelpat Sequence 280 from Patent EP2620501. 8674 bp synthetic construct QL-ELE-00-012 82 bp View
JB865975.1 emblrelpat Sequence 289 from Patent EP2620501. 8677 bp synthetic construct QL-ELE-00-012 82 bp View
JB865980.1 emblrelpat Sequence 294 from Patent EP2620501. 8314 bp synthetic construct QL-ELE-00-012 82 bp View
JB865986.1 emblrelpat Sequence 300 from Patent EP2620501. 8761 bp synthetic construct QL-ELE-00-012 82 bp View
JB866009.1 emblrelpat Sequence 323 from Patent EP2620501. 5303 bp synthetic construct QL-ELE-00-012 82 bp View
JB866010.1 emblrelpat Sequence 324 from Patent EP2620501. 8358 bp synthetic construct QL-ELE-00-012 82 bp View
JB866012.1 emblrelpat Sequence 326 from Patent EP2620501. 9592 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.