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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
JB750661.1 emblrelpat Sequence 56 from Patent WO2013096562. 13304 bp synthetic construct QL-ELE-00-012 82 bp View
JB750662.1 emblrelpat Sequence 57 from Patent WO2013096562. 13838 bp synthetic construct QL-ELE-00-012 82 bp View
JB750663.1 emblrelpat Sequence 58 from Patent WO2013096562. 13601 bp synthetic construct QL-ELE-00-012 82 bp View
JB750666.1 emblrelpat Sequence 61 from Patent WO2013096562. 13334 bp synthetic construct QL-ELE-00-012 82 bp View
JB750667.1 emblrelpat Sequence 62 from Patent WO2013096562. 13868 bp synthetic construct QL-ELE-00-012 82 bp View
JB750668.1 emblrelpat Sequence 63 from Patent WO2013096562. 13631 bp synthetic construct QL-ELE-00-012 82 bp View
JB750676.1 emblrelpat Sequence 71 from Patent WO2013096562. 10115 bp synthetic construct QL-ELE-00-012 82 bp View
JB750677.1 emblrelpat Sequence 72 from Patent WO2013096562. 10462 bp synthetic construct QL-ELE-00-012 82 bp View
JB750678.1 emblrelpat Sequence 73 from Patent WO2013096562. 13440 bp synthetic construct QL-ELE-00-012 82 bp View
JB750679.1 emblrelpat Sequence 74 from Patent WO2013096562. 13787 bp synthetic construct QL-ELE-00-012 82 bp View
JB750680.1 emblrelpat Sequence 75 from Patent WO2013096562. 13470 bp synthetic construct QL-ELE-00-012 82 bp View
JB750681.1 emblrelpat Sequence 76 from Patent WO2013096562. 13817 bp synthetic construct QL-ELE-00-012 82 bp View
JB750692.1 emblrelpat Sequence 87 from Patent WO2013096562. 9401 bp synthetic construct QL-ELE-00-012 82 bp View
JB750693.1 emblrelpat Sequence 88 from Patent WO2013096562. 10648 bp synthetic construct QL-ELE-00-012 82 bp View
JB750694.1 emblrelpat Sequence 89 from Patent WO2013096562. 14004 bp synthetic construct QL-ELE-00-012 82 bp View
JB830033.1 emblrelpat Sequence 1 from Patent EP2480658. 3067 bp synthetic construct QL-ELE-00-012 82 bp View
JB830047.1 emblrelpat Sequence 1 from Patent EP2480560. 3067 bp synthetic construct QL-ELE-00-012 82 bp View
JB865332.1 emblrelpat Sequence 21 from Patent EP2620500. 7049 bp synthetic construct QL-ELE-00-012 82 bp View
JB865336.1 emblrelpat Sequence 25 from Patent EP2620500. 8138 bp synthetic construct QL-ELE-00-012 82 bp View
JB865337.1 emblrelpat Sequence 26 from Patent EP2620500. 7085 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.