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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
JB623751.1 emblrelpat Sequence 100 from Patent EP2610345. 3067 bp synthetic construct QL-ELE-00-012 82 bp View
JB623752.1 emblrelpat Sequence 101 from Patent EP2610345. 3091 bp synthetic construct QL-ELE-00-012 82 bp View
JB623755.1 emblrelpat Sequence 104 from Patent EP2610345. 3058 bp synthetic construct QL-ELE-00-012 82 bp View
JB623756.1 emblrelpat Sequence 105 from Patent EP2610345. 3079 bp synthetic construct QL-ELE-00-012 82 bp View
JB623759.1 emblrelpat Sequence 108 from Patent EP2610345. 3061 bp synthetic construct QL-ELE-00-012 82 bp View
JB623760.1 emblrelpat Sequence 109 from Patent EP2610345. 3085 bp synthetic construct QL-ELE-00-012 82 bp View
JB623763.1 emblrelpat Sequence 112 from Patent EP2610345. 3115 bp synthetic construct QL-ELE-00-012 82 bp View
JB623764.1 emblrelpat Sequence 113 from Patent EP2610345. 3142 bp synthetic construct QL-ELE-00-012 82 bp View
JB746171.1 emblrelpat Sequence 26 from Patent WO2013067289. 11810 bp synthetic construct QL-ELE-00-012 82 bp View
JB746171.1 emblrelpat Sequence 26 from Patent WO2013067289. 11810 bp synthetic construct QL-ELE-00-012 82 bp View
JB746172.1 emblrelpat Sequence 27 from Patent WO2013067289. 13036 bp synthetic construct QL-ELE-00-012 82 bp View
JB746172.1 emblrelpat Sequence 27 from Patent WO2013067289. 13036 bp synthetic construct QL-ELE-00-012 82 bp View
JB746173.1 emblrelpat Sequence 28 from Patent WO2013067289. 13036 bp synthetic construct QL-ELE-00-012 82 bp View
JB746173.1 emblrelpat Sequence 28 from Patent WO2013067289. 13036 bp synthetic construct QL-ELE-00-012 82 bp View
JB747426.1 emblrelpat Sequence 1 from Patent WO2013067026. 525 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
JB750619.1 emblrelpat Sequence 14 from Patent WO2013096562. 9266 bp synthetic construct QL-ELE-00-012 82 bp View
JB750655.1 emblrelpat Sequence 50 from Patent WO2013096562. 9979 bp synthetic construct QL-ELE-00-012 82 bp View
JB750656.1 emblrelpat Sequence 51 from Patent WO2013096562. 10513 bp synthetic construct QL-ELE-00-012 82 bp View
JB750657.1 emblrelpat Sequence 52 from Patent WO2013096562. 10276 bp synthetic construct QL-ELE-00-012 82 bp View
JB750658.1 emblrelpat Sequence 53 from Patent WO2013096562. 10995 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.