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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
JA729970.1 emblrelpat Sequence 54 from Patent EP2405012. 9088 bp synthetic construct QL-ELE-00-012 82 bp View
JA734764.1 emblrelpat Sequence 2 from Patent EP2407543. 534 bp synthetic construct QL-ELE-00-012 82 bp View
JA739800.1 emblrelpat Sequence 21 from Patent WO2012009548. 6547 bp synthetic construct QL-ELE-00-012 82 bp View
JA739801.1 emblrelpat Sequence 22 from Patent WO2012009548. 3191 bp synthetic construct QL-ELE-00-012 82 bp View
JA761603.1 emblrelpat Sequence 5 from Patent WO2012013823. 2452 bp synthetic construct QL-ELE-00-012 82 bp View
JA761603.1 emblrelpat Sequence 5 from Patent WO2012013823. 2452 bp synthetic construct QL-ELE-00-012 82 bp View
JA765424.1 emblrelpat Sequence 5 from Patent EP2418283. 7424 bp synthetic construct QL-ELE-00-012 82 bp View
JA765425.1 emblrelpat Sequence 6 from Patent EP2418283. 6660 bp synthetic construct QL-ELE-00-012 82 bp View
JA774356.1 emblrelpat Sequence 5 from Patent WO2012019660. 7424 bp synthetic construct QL-ELE-00-012 82 bp View
JA774357.1 emblrelpat Sequence 6 from Patent WO2012019660. 6660 bp synthetic construct QL-ELE-00-012 82 bp View
JA774360.1 emblrelpat Sequence 9 from Patent WO2012019660. 7714 bp synthetic construct QL-ELE-00-012 82 bp View
JA774361.1 emblrelpat Sequence 10 from Patent WO2012019660. 8294 bp synthetic construct QL-ELE-00-012 82 bp View
JA779815.1 emblrelpat Sequence 11 from Patent EP2419514. 10767 bp synthetic construct QL-ELE-00-012 82 bp View
JA779816.1 emblrelpat Sequence 12 from Patent EP2419514. 11415 bp synthetic construct QL-ELE-00-012 82 bp View
JA779818.1 emblrelpat Sequence 14 from Patent EP2419514. 12202 bp synthetic construct QL-ELE-00-012 82 bp View
JA779820.1 emblrelpat Sequence 16 from Patent EP2419514. 12537 bp synthetic construct QL-ELE-00-012 82 bp View
JA780997.1 emblrelpat Sequence 1 from Patent WO2012048221. 16800 bp synthetic construct QL-ELE-00-012 82 bp View
JA780998.1 emblrelpat Sequence 2 from Patent WO2012048221. 10933 bp synthetic construct QL-ELE-00-012 82 bp View
JA780998.1 emblrelpat Sequence 2 from Patent WO2012048221. 10933 bp synthetic construct QL-ELE-00-012 82 bp View
JA781826.1 emblrelpat Sequence 3 from Patent EP2513326. 11361 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.