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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 831 amplicons

Restrict to taxon(s):


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MV593175.1 emblrelpat Sequence 9 from patent US 10738320. 6466 bp unidentified QL-ELE-00-010 196 bp View
MV593175.1 emblrelpat Sequence 9 from patent US 10738320. 6466 bp unidentified QL-ELE-00-015 78 bp View
MV668282.1 emblrelpat Sequence 83 from patent US 10767191. 3706 bp unidentified QL-ELE-00-010 196 bp View
MV668282.1 emblrelpat Sequence 83 from patent US 10767191. 3706 bp unidentified QL-ELE-00-015 78 bp View
MV668288.1 emblrelpat Sequence 89 from patent US 10767191. 1042 bp unidentified QL-ELE-00-010 196 bp View
MV668288.1 emblrelpat Sequence 89 from patent US 10767191. 1042 bp unidentified QL-ELE-00-015 78 bp View
MV818858.1 emblrelpat Sequence 3 from patent US 10813352. 2880 bp unidentified QL-ELE-00-010 196 bp View
MV818858.1 emblrelpat Sequence 3 from patent US 10813352. 2880 bp unidentified QL-ELE-00-015 78 bp View
MX640758.1 emblrelpat . 1752 bp unidentified QL-ELE-00-010 196 bp View
MX640758.1 emblrelpat . 1752 bp unidentified QL-ELE-00-015 78 bp View
MX640759.1 emblrelpat Sequence 2 from patent US 10995340. 2303 bp unidentified QL-ELE-00-010 196 bp View
MX640759.1 emblrelpat Sequence 2 from patent US 10995340. 2303 bp unidentified QL-ELE-00-015 78 bp View
MX640760.1 emblrelpat Sequence 3 from patent US 10995340. 1050 bp unidentified QL-ELE-00-010 196 bp View
MX640760.1 emblrelpat Sequence 3 from patent US 10995340. 1050 bp unidentified QL-ELE-00-015 78 bp View
MX640761.1 emblrelpat Sequence 4 from patent US 10995340. 898 bp unidentified QL-ELE-00-010 196 bp View
MX640761.1 emblrelpat Sequence 4 from patent US 10995340. 898 bp unidentified QL-ELE-00-015 78 bp View
MX640762.1 emblrelpat Sequence 5 from patent US 10995340. 1971 bp unidentified QL-ELE-00-010 196 bp View
MX640762.1 emblrelpat Sequence 5 from patent US 10995340. 1971 bp unidentified QL-ELE-00-015 78 bp View
MX640763.1 emblrelpat Sequence 6 from patent US 10995340. 2167 bp unidentified QL-ELE-00-010 196 bp View
MX640763.1 emblrelpat Sequence 6 from patent US 10995340. 2167 bp unidentified QL-ELE-00-015 78 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.