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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 525 bp 
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat
101   gggcaatcct gagccaaatc ccttttttga aaaaacaagc ggttctcaaa
151   ctagaaccca aaggaaaagg ataggtgcag agactcaatg gaagctgttc
201   taacgaatcg aagtaataac gattaatcac agaacccata ttataatata
251   ggttctttat tttattttta gaatgaaatt aggaatgatt atgaaataga
301   aaattcataa ttttttgaga attattgtga atctattcca atcaaatatt
351   gagtaatcaa atccttcaat tcattgtttt cgagatcttt taaaaagtgg
401   attaatcgga cgaggataaa gagagagtcc cattctacat gtcaatactg
451   acaacaatga aatttctagt aaaaggaaaa tccgtcgact ttataagtcg
501   tgagggttca agtccctcta tcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KT279382.1 nt Bothriochloa macra isolate 266 tRNA... 1549 bp Bothriochloa macra QL-PLN-00-007 525 bp View
KT279383.1 nt Bothriochloa macra isolate 267 tRNA... 1582 bp Bothriochloa macra QL-PLN-00-007 525 bp View
KT279385.1 nt Bothriochloa macra isolate 273 tRNA... 1582 bp Bothriochloa macra QL-PLN-00-007 525 bp View
KT279384.1 nt Bothriochloa macra isolate 272 tRNA... 1615 bp Bothriochloa macra QL-PLN-00-007 525 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.