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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcgcc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KC577242.1 nt Cloning vector pCR2.1-sacB, complet... 5522 bp Cloning vector pCR2.1-sacB QL-ELE-00-003 173 bp View
KF532954.1 nt Cloning vector pPS2305, complete se... 4381 bp Cloning vector pPS2305 QL-ELE-00-003 173 bp View
KF532955.1 nt Cloning vector pPS2836, complete se... 4726 bp Cloning vector pPS2836 QL-ELE-00-003 173 bp View
BD355629.1 emblrelpat NUCLEIC ACID MOLECULES ENCODING TRA... 3908 bp Escherichia coli QL-ELE-00-003 173 bp View
AX195198.1 emblrelpat Sequence 3 from Patent WO0151626. 5943 bp synthetic construct QL-ELE-00-003 173 bp View
CS249194.1 emblrelpat Sequence 66 from Patent WO2005121347. 7341 bp synthetic construct QL-ELE-00-003 173 bp View
JA137295.1 emblrelpat Sequence 11 from Patent EP2307552. 8191 bp synthetic construct QL-ELE-00-003 173 bp View
KX353610.1 nt Synthetic plasmid pCore, complete s... 8631 bp Synthetic plasmid pCore QL-ELE-00-003 173 bp View
LT727196.1 nt Plant expression vector pAS104, com... 4307 bp Plant expression vector pAS104 QL-ELE-00-003 173 bp View
LT727447.1 nt Vector pCRhBCL2, complete sequence 4715 bp Vector pCRhBCL2 QL-ELE-00-003 173 bp View
AR146213.1 emblrelpat Sequence 15 from patent US 6218185. 6448 bp unidentified QL-ELE-00-003 173 bp View
GP429668.1 emblrelpat Sequence 17 from patent US 7528241. 3906 bp unidentified QL-ELE-00-003 173 bp View
MV712350.1 emblrelpat Sequence 10 from patent US 10774345. 8190 bp unidentified QL-ELE-00-003 173 bp View
HJ111404.1 emblrelpat Sequence 7 from patent US 8450549. 8191 bp unidentified QL-ELE-00-003 173 bp View
E36258.1 emblrelpat Human semaphorin L (H-SemaL) and co... 5856 bp Homo sapiens QL-ELE-00-003 173 bp View
LX265380.1 emblrelpat JP 2016039831-A/7: Product and Proc... 4646 bp Schizochytrium sp. QL-ELE-00-003 173 bp View
HJ238248.1 emblrelpat Sequence 11 from patent US 8476049. 8191 bp unidentified QL-ELE-00-003 173 bp View
AX207942.1 emblrelpat Sequence 46 from Patent WO0157194. 3908 bp Escherichia coli QL-ELE-00-003 173 bp View
CS163134.1 emblrelpat Sequence 15 from Patent WO2005084706. 7448 bp Brucella melitensis QL-ELE-00-003 173 bp View
NRN_CS249189 nrnl1 Sequence 61 from Patent WO2005121347. 6914 bp unidentified QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.