Amplicon details

Amplicon:

606 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaat
101   gggcaatcct gagccaaatc ccacttttga taaacaagcg gttctcaaac
151   tagaacccaa aggaaaagga taggtgcaga gactcaatgg aagctgttct
201   aacgaatcga ggtaattacg ttgtgttggt agggaaactc cctctaaatt
251   agagaaagaa gggctttata gatctaatac acacgtatgg atactggcat
301   agcaaaccaa aggattaatc acagaatcct atatcataat atcataatat
351   aggttcttta tttatttttg aaaatgaaat tcagaattat tatgaaatag
401   aaaattctga atccattcta ctcgaacatt gagtaatcaa atccttcatt
451   cattgttttt gagatctttt aaaaagtgga gattaatcgg acgaggataa
501   agagagagtc ccattctaca tgtcaatact gacaacaatg aaatttctag
551   taaaaggaaa atccgtcgac tttataagtt gtgagggttc aagtccctct
601   atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MH036235.1 nt Eriachne aristidea chloroplast, com... 134521 bp Eriachne aristidea QL-PLN-00-007 606 bp View
MH036236.1 nt Eriachne aristidea chloroplast, com... 134546 bp Eriachne aristidea QL-PLN-00-007 606 bp View
MH036270.1 nt Eriachne pauciflora chloroplast, co... 134468 bp Eriachne pauciflora QL-PLN-00-007 606 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.