Amplicon details

Amplicon:

609 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat
101   gggcaatcct gagccaaatc ccttttttga aaaaacaagt ggttctcaaa
151   ctagaaccca aaggaaaagg ataggtgcag agactcaatg gaagctgttc
201   taacgaatcg aagtaattac gttgtgttgg tagtggaact ccctcgaaat
251   tagagaaaga agggctttag acatctaata cacacgtata gatactgaca
301   tagcaaacga ttaatcacag aacccatatc ataatatagg ttctttattt
351   tattagaatg aaattaggaa tgattatgaa atagaaaatt cagaattttt
401   ttataattat tgtgaatcca ttccaatcga atattgagta atcaactcct
451   tcaattcatt gttttgagat ctttaaaaaa gtagattaat cgaacgagga
501   taaagagaga gtcccattct acatgtcaat actgacaaca atgaaatttc
551   tagtaaaagg aaaatccgtc gactttataa gtcgtgaggg ttcaagtccc
601   tctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MH394349.1 nt Panicum incomtum chloroplast, compl... 139999 bp Panicum incomtum QL-PLN-00-007 609 bp View
MH394350.1 nt Panicum incomtum chloroplast, compl... 139986 bp Panicum incomtum QL-PLN-00-007 609 bp View
MH394351.1 nt Panicum incomtum chloroplast, compl... 139999 bp Panicum incomtum QL-PLN-00-007 609 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.