Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY456412.1 nt Cloning vector pZGA22, complete seq... 14701 bp Cloning vector pZGA22 QL-ELE-00-003 173 bp View
JN947672.1 nt Mus musculus targeted non-condition... 39366 bp Mus musculus QL-ELE-00-003 173 bp View
JN948541.1 emblreltgn Mus musculus targeted KO-first, con... 39370 bp Mus musculus QL-ELE-00-003 173 bp View
JN947673.1 nt Mus musculus targeted non-condition... 38586 bp Mus musculus QL-ELE-00-003 173 bp View
JN947674.1 nt Mus musculus targeted non-condition... 38038 bp Mus musculus QL-ELE-00-003 173 bp View
AY781399.1 nt Synthetic construct transposon mini... 2413 bp synthetic construct QL-ELE-00-003 173 bp View
AY781402.1 nt Synthetic construct transposon mini... 2062 bp synthetic construct QL-ELE-00-003 173 bp View
AY781403.1 nt Synthetic construct transposon mini... 1937 bp synthetic construct QL-ELE-00-003 173 bp View
AY781406.1 nt Synthetic construct transposon mini... 2162 bp synthetic construct QL-ELE-00-003 173 bp View
AY781407.1 nt Synthetic construct transposon mini... 2037 bp synthetic construct QL-ELE-00-003 173 bp View
KJ500179.1 nt Integration vector pZR606, complete... 8411 bp Integration vector pZR606 QL-ELE-00-003 173 bp View
JN947675.1 nt Mus musculus targeted non-condition... 37944 bp Mus musculus QL-ELE-00-003 173 bp View
AY952935.1 nt Expression vector pFNK-101, complet... 4099 bp Expression vector pFNK-101 QL-ELE-00-003 173 bp View
AY952936.1 nt Expression vector pINV-110, complet... 4887 bp Expression vector pINV-110 QL-ELE-00-003 173 bp View
AY622810.1 nt Cloning shuttle vector pSCR119, com... 8786 bp Cloning shuttle vector pSCR119 QL-ELE-00-003 173 bp View
AY622811.1 nt Shuttle reporter vector pSUN119, co... 9816 bp Shuttle reporter vector pSUN119 QL-ELE-00-003 173 bp View
DQ172900.1 nt Transfection vector pC-PTP-NEO, com... 6662 bp Transfection vector pC-PTP-NEO QL-ELE-00-003 173 bp View
DQ225746.1 nt Gene trapping Ds/T-DNA vector pUR22... 22828 bp Gene trapping Ds/T-DNA vector pUR224NA QL-ELE-00-003 173 bp View
JN948542.1 emblreltgn Mus musculus targeted KO-first, con... 38281 bp Mus musculus QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.