Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AF264723.1 nt Cloning Vector pACT, complete sequence. 5566 bp Cloning Vector pACT QL-ELE-00-003 173 bp View
AJ302087.1 nt Synthetic construct for alkane-resp... 7675 bp synthetic construct QL-ELE-00-003 173 bp View
D84238.1 nt Nicotiana tabacum DNA, transgene in... 12494 bp Nicotiana tabacum QL-ELE-00-003 173 bp View
D84238.1 nt Nicotiana tabacum DNA, transgene in... 12494 bp Nicotiana tabacum QL-ELE-00-003 173 bp View
JN948539.1 emblreltgn Mus musculus targeted non-condition... 39043 bp Mus musculus QL-ELE-00-003 173 bp View
DQ789393.1 nt Synthetic construct neomycin phosph... 2488 bp synthetic construct QL-ELE-00-003 173 bp View
DQ487155.1 nt Flexi vector pF5A CMV-neo, complete... 5591 bp Flexi vector pF5A CMV-neo QL-ELE-00-003 173 bp View
DQ487156.1 nt Flexi vector pF5K CMV-neo, complete... 4594 bp Flexi vector pF5K CMV-neo QL-ELE-00-003 173 bp View
CP083532.1 nt Escherichia coli strain elppa2 plas... 268672 bp Escherichia coli QL-ELE-00-003 173 bp View
JN947668.1 nt Mus musculus targeted non-condition... 38478 bp Mus musculus QL-ELE-00-003 173 bp View
AJ414108.1 nt Binary vector pGV4042 DNA, region b... 3669 bp Binary vector pGV4042 QL-ELE-00-003 173 bp View
AJ414109.1 nt Binary vector pGV4126 DNA, region b... 5341 bp Binary vector pGV4126 QL-ELE-00-003 173 bp View
AJ414110.1 nt Binary vector pGV4128 DNA, region b... 5439 bp Binary vector pGV4128 QL-ELE-00-003 173 bp View
AJ414111.1 nt Binary vector pGV4223 DNA, region b... 5582 bp Binary vector pGV4223 QL-ELE-00-003 173 bp View
JN947669.1 nt Mus musculus targeted KO-first, con... 38636 bp Mus musculus QL-ELE-00-003 173 bp View
JN947670.1 nt Mus musculus targeted non-condition... 37881 bp Mus musculus QL-ELE-00-003 173 bp View
AY147202.1 nt Binary vector pGV4939 kanamycin res... 6643 bp Binary vector pGV4939 QL-ELE-00-003 173 bp View
JN947671.1 nt Mus musculus targeted non-condition... 38179 bp Mus musculus QL-ELE-00-003 173 bp View
AB090853.1 nt Synthetic construct genes for zebra... 7869 bp synthetic construct QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.