Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
U12540.1 nt Plant transformation vector pBin19 ... 3212 bp Cloning vector pBin19 QL-ELE-00-003 173 bp View
U12638.1 nt Promoter-trapping vector pdeltagusB... 13911 bp Cloning vector pdeltagusBin19 QL-ELE-00-003 173 bp View
U51558.1 nt Expression vector pEXT22, complete ... 6074 bp Expression vector pEXT22 QL-ELE-00-003 173 bp View
U52109.1 nt Cloning vector pLK-neo DNA. 7087 bp Cloning vector pLK-neo QL-ELE-00-003 173 bp View
U57606.1 nt Cloning vector pEGFP-C2 with enhanc... 4735 bp Cloning vector pEGFP-C2 QL-ELE-00-003 173 bp View
U55761.1 nt Cloning vector pEGFP-1, complete se... 4151 bp Cloning vector pEGFP-1 QL-ELE-00-003 173 bp View
U55763.1 nt Cloning vector pEGFP-C1, complete s... 4731 bp Cloning vector pEGFP-C1 QL-ELE-00-003 173 bp View
JN948528.1 emblreltgn Mus musculus targeted KO-first, con... 38434 bp Mus musculus QL-ELE-00-003 173 bp View
X98409.1 nt Artificial cloning vector Lorist2 5620 bp synthetic construct QL-ELE-00-003 173 bp View
X98450.1 nt Artificial cloning vector Lorist6 5260 bp synthetic construct QL-ELE-00-003 173 bp View
X99439.1 nt Artificial cloning vector Lorist4 5407 bp synthetic construct QL-ELE-00-003 173 bp View
U63018.1 nt Cloning vector pRAY-1, complete seq... 5225 bp Cloning vector pRAY-1 QL-ELE-00-003 173 bp View
U63120.1 nt Cloning vector pRAY-2, complete seq... 4102 bp Cloning vector pRAY-2 QL-ELE-00-003 173 bp View
X99274.1 nt Artificial sequence DNA for express... 7218 bp synthetic construct QL-ELE-00-003 173 bp View
Y11035.1 nt Artificial DNA; bicistronic eukaryo... 5284 bp synthetic construct QL-ELE-00-003 173 bp View
U89673.1 nt Cloning vector pIRES1neo, complete ... 5257 bp unidentified cloning vector QL-ELE-00-003 173 bp View
U90717.1 nt Transfection reporter vector pAV4p,... 6109 bp synthetic construct QL-ELE-00-003 173 bp View
Z93724.1 nt Murine retrovirus shuttle vector pZ... 7020 bp synthetic construct QL-ELE-00-003 173 bp View
U93512.1 nt Cloning vector CA1, complete sequence. 8756 bp synthetic construct QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.