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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
U19279.1 nt Cloning vector pGFP-N1 green fluore... 4728 bp Cloning vector pGFP-N1 QL-ELE-00-003 173 bp View
U19282.1 nt Cloning vector pGFP-N2 green fluore... 4732 bp Cloning vector pGFP-N2 QL-ELE-00-003 173 bp View
U35127.1 nt Plasmid pBSL128 cloning vector, com... 5060 bp Cloning vector pBSL128 QL-ELE-00-003 173 bp View
U35136.1 nt Plasmid pBSL97 cloning vector, comp... 4289 bp Cloning vector pBSL97 QL-ELE-00-003 173 bp View
U35137.1 nt Plasmid pBSL99 cloning vector, comp... 4285 bp Cloning vector pBSL99 QL-ELE-00-003 173 bp View
L38498.1 nt Cloning vector pKIL118 ccdB gene, c... 2999 bp Cloning vector pKIL118 QL-ELE-00-003 173 bp View
JN948527.1 emblreltgn Mus musculus targeted KO-first, con... 38109 bp Mus musculus QL-ELE-00-003 173 bp View
L38499.1 nt Cloning vector pKIL119 ccdB gene, c... 2999 bp Cloning vector pKIL119 QL-ELE-00-003 173 bp View
U37573.1 nt Phagemid vector pBK-CMV, complete s... 4518 bp Phagemid vector pBK-CMV QL-ELE-00-003 173 bp View
U36201.1 nt Cloning vector pRSGFP-C1, with gree... 4728 bp Cloning vector pRSGFP-C1 QL-ELE-00-003 173 bp View
U36202.1 nt Cloning vector pS65T-C1, with green... 4728 bp Cloning vector pS65T-C1 QL-ELE-00-003 173 bp View
U42372.1 nt Cloning vector pOPRSVICat target ve... 6243 bp Cloning vector pOPRSVICat QL-ELE-00-003 173 bp View
U42373.1 nt Cloning vector pOPI3Cat target vect... 6289 bp Cloning vector pOPI3Cat QL-ELE-00-003 173 bp View
U46780.1 nt Synthetic construct trap vector for... 8097 bp synthetic construct QL-ELE-00-003 173 bp View
X96612.1 nt Expression vector pCMVPA1 for prote... 6331 bp synthetic construct QL-ELE-00-003 173 bp View
X96610.1 nt Expression vector pCMVPA2 for prote... 6335 bp synthetic construct QL-ELE-00-003 173 bp View
X96611.1 nt Expression vector pCMVPA3 for prote... 6333 bp synthetic construct QL-ELE-00-003 173 bp View
U43612.1 nt Cloning vector pMC1neo-polyA, compl... 3857 bp Cloning vector pMC1neo-polyA QL-ELE-00-003 173 bp View
U46492.1 nt Cloning vector pFRT2neo.lacZ beta-g... 7378 bp Cloning vector pFRT2neo.lacZ QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.