Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
U10490.1 nt Binary cloning vector pPZP211 for p... 9014 bp Cloning vector pPZP211 QL-ELE-00-003 173 bp View
JN948525.1 emblreltgn Mus musculus targeted non-condition... 37947 bp Mus musculus QL-ELE-00-003 173 bp View
U12640.1 nt GUS gene fusion vector pBI101.3 T-D... 5352 bp Cloning vector pBI101.3 QL-ELE-00-003 173 bp View
U12668.1 nt GUS gene fusion vector pBI101.2 T-D... 5351 bp Cloning vector pBI101.2 QL-ELE-00-003 173 bp View
U13189.1 nt Cloning vector pYACneo, complete se... 15827 bp Cloning vector pYACneo QL-ELE-00-003 173 bp View
U13761.1 nt Cloning vector pDO192, complete seq... 6735 bp Cloning vector pDO192 QL-ELE-00-003 173 bp View
L36555.1 nt Cloning vector murine T-cell recept... 5564 bp unidentified cloning vector QL-ELE-00-003 173 bp View
U13862.1 nt pNEO cloning vector, complete sequence. 5508 bp unidentified cloning vector QL-ELE-00-003 173 bp View
U19278.1 nt Cloning vector pGFP-C3 green fluore... 4724 bp Cloning vector pGFP-C3 QL-ELE-00-003 173 bp View
U19280.1 nt Cloning vector pGFP-C1 green fluore... 4728 bp Cloning vector pGFP-C1 QL-ELE-00-003 173 bp View
JN948526.1 emblreltgn Mus musculus targeted KO-first, con... 38146 bp Mus musculus QL-ELE-00-003 173 bp View
U19281.1 nt Cloning vector pGFP-C2 green fluore... 4732 bp Cloning vector pGFP-C2 QL-ELE-00-003 173 bp View
X85118.1 nt Artificial sequences cloning vector... 6113 bp synthetic construct QL-ELE-00-003 173 bp View
X85119.1 nt Artificial sequences cloning vector... 6105 bp synthetic construct QL-ELE-00-003 173 bp View
X85123.1 nt Artificial sequences cloning vector... 6134 bp synthetic construct QL-ELE-00-003 173 bp View
X85122.1 nt Artificial sequences cloning vector... 6108 bp synthetic construct QL-ELE-00-003 173 bp View
X85121.1 nt Artificial sequences cloning vector... 6789 bp synthetic construct QL-ELE-00-003 173 bp View
X85120.1 nt Artificial sequences cloning vector... 6781 bp synthetic construct QL-ELE-00-003 173 bp View
U19276.1 nt Cloning vector pGFP-1 green fluores... 4146 bp Cloning vector pGFP-1 QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.