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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN962461.1 emblreltgn Mus musculus targeted KO-first, con... 38704 bp Mus musculus QL-ELE-00-003 173 bp View
JN962495.1 emblreltgn Mus musculus targeted KO-first, con... 37944 bp Mus musculus QL-ELE-00-003 173 bp View
JN962502.1 emblreltgn Mus musculus targeted KO-first, con... 36715 bp Mus musculus QL-ELE-00-003 173 bp View
JN962509.1 emblreltgn Mus musculus targeted KO-first, con... 36459 bp Mus musculus QL-ELE-00-003 173 bp View
JN962516.1 emblreltgn Mus musculus targeted non-condition... 38058 bp Mus musculus QL-ELE-00-003 173 bp View
JN962523.1 emblreltgn Mus musculus targeted KO-first, con... 38840 bp Mus musculus QL-ELE-00-003 173 bp View
JN962550.1 emblreltgn Mus musculus targeted KO-first, con... 37965 bp Mus musculus QL-ELE-00-003 173 bp View
JN962577.1 emblreltgn Mus musculus targeted KO-first, con... 40041 bp Mus musculus QL-ELE-00-003 173 bp View
JN962584.1 emblreltgn Mus musculus targeted non-condition... 37965 bp Mus musculus QL-ELE-00-003 173 bp View
JN962597.1 emblreltgn Mus musculus targeted KO-first, con... 36524 bp Mus musculus QL-ELE-00-003 173 bp View
JN962604.1 emblreltgn Mus musculus targeted KO-first, con... 37132 bp Mus musculus QL-ELE-00-003 173 bp View
JN962611.1 emblreltgn Mus musculus targeted KO-first, con... 38010 bp Mus musculus QL-ELE-00-003 173 bp View
JN962618.1 emblreltgn Mus musculus targeted non-condition... 40667 bp Mus musculus QL-ELE-00-003 173 bp View
JN962632.1 emblreltgn Mus musculus targeted KO-first, con... 41015 bp Mus musculus QL-ELE-00-003 173 bp View
JN962652.1 emblreltgn Mus musculus targeted KO-first, con... 39575 bp Mus musculus QL-ELE-00-003 173 bp View
JN962672.1 emblreltgn Mus musculus targeted KO-first, con... 38093 bp Mus musculus QL-ELE-00-003 173 bp View
JN962712.1 emblreltgn Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN962719.1 emblreltgn Mus musculus targeted non-condition... 38038 bp Mus musculus QL-ELE-00-003 173 bp View
JN962726.1 emblreltgn Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN962746.1 emblreltgn Mus musculus targeted non-condition... 36645 bp Mus musculus QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.