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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MK948097.1 nt Expression vector pMTagBFP2-npt, co... 4830 bp Expression vector pMTagBFP2-npt QL-ELE-00-003 173 bp View
MN811101.1 nt Expression vector pKK82, complete s... 6182 bp Expression vector pKK82 QL-ELE-00-003 173 bp View
MN811115.1 nt Expression vector pGM47, complete s... 9297 bp Expression vector pGM47 QL-ELE-00-003 173 bp View
JN955968.1 emblreltgn Mus musculus targeted non-condition... 38421 bp Mus musculus QL-ELE-00-003 173 bp View
JN955274.1 emblreltgn Mus musculus targeted KO-first, con... 37996 bp Mus musculus QL-ELE-00-003 173 bp View
JN955281.1 emblreltgn Mus musculus targeted KO-first, con... 38235 bp Mus musculus QL-ELE-00-003 173 bp View
JN955288.1 emblreltgn Mus musculus targeted KO-first, con... 38186 bp Mus musculus QL-ELE-00-003 173 bp View
JN955295.1 emblreltgn Mus musculus targeted KO-first, con... 40339 bp Mus musculus QL-ELE-00-003 173 bp View
JN955302.1 emblreltgn Mus musculus targeted KO-first, con... 38088 bp Mus musculus QL-ELE-00-003 173 bp View
JN955315.1 emblreltgn Mus musculus targeted non-condition... 36385 bp Mus musculus QL-ELE-00-003 173 bp View
JN955335.1 emblreltgn Mus musculus targeted KO-first, con... 40640 bp Mus musculus QL-ELE-00-003 173 bp View
JN955342.1 emblreltgn Mus musculus targeted KO-first, con... 37967 bp Mus musculus QL-ELE-00-003 173 bp View
JN955355.1 emblreltgn Mus musculus targeted non-condition... 38465 bp Mus musculus QL-ELE-00-003 173 bp View
JN955375.1 emblreltgn Mus musculus targeted KO-first, con... 37925 bp Mus musculus QL-ELE-00-003 173 bp View
JN955395.1 emblreltgn Mus musculus targeted KO-first, con... 39260 bp Mus musculus QL-ELE-00-003 173 bp View
JN955421.1 emblreltgn Mus musculus targeted KO-first, con... 37982 bp Mus musculus QL-ELE-00-003 173 bp View
JN955644.1 emblreltgn Mus musculus targeted KO-first, con... 39340 bp Mus musculus QL-ELE-00-003 173 bp View
JN955685.1 emblreltgn Mus musculus targeted non-condition... 39121 bp Mus musculus QL-ELE-00-003 173 bp View
JN955692.1 emblreltgn Mus musculus targeted non-condition... 37873 bp Mus musculus QL-ELE-00-003 173 bp View
JN955699.1 emblreltgn Mus musculus targeted non-condition... 38052 bp Mus musculus QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.