Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KJ081779.1 nt Cloning vector pBullet-pm-n, comple... 9292 bp Cloning vector pBullet-pm-n QL-ELE-00-003 173 bp View
KJ081784.1 nt Cloning vector pBullet-vac-c, compl... 9209 bp Cloning vector pBullet-vac-c QL-ELE-00-003 173 bp View
MW247153.1 nt Synthetic construct clone scMS2-dEG... 4770 bp synthetic construct QL-ELE-00-003 173 bp View
MW247168.1 nt Synthetic construct clone nTEVp-PLY... 6118 bp synthetic construct QL-ELE-00-003 173 bp View
CP024153.1 nt Escherichia coli strain 14EC033 pla... 98181 bp Escherichia coli QL-ELE-00-003 173 bp View
MG188271.1 nt Cloning vector pCA-DEST1103, comple... 8713 bp Cloning vector pCA-DEST1103 QL-ELE-00-003 173 bp View
MG188287.1 nt Cloning vector pCA-DEST1320, comple... 9094 bp Cloning vector pCA-DEST1320 QL-ELE-00-003 173 bp View
MG188304.1 nt Cloning vector pCA-DEST2301, comple... 8663 bp Cloning vector pCA-DEST2301 QL-ELE-00-003 173 bp View
MH777597.1 nt Vector pLeu-tRNA.LeuRS, complete se... 9517 bp Vector pLeu-tRNA.LeuRS QL-ELE-00-003 173 bp View
MH325111.1 nt Vector pcDNA3.1-KanFDEST, complete ... 8075 bp Vector pcDNA3.1-KanFDEST QL-ELE-00-003 173 bp View
MF189861.1 nt Cloning vector pPKm-102, complete s... 6100 bp Cloning vector pPKm-102 QL-ELE-00-003 173 bp View
CP019253.1 nt Escherichia coli strain 13KWH46 pla... 120300 bp Escherichia coli QL-ELE-00-003 173 bp View
MH488952.1 nt Cloning vector pBBR1-rppA, complete... 6234 bp Cloning vector pBBR1-rppA QL-ELE-00-003 173 bp View
MH614589.1 nt Synthetic construct clone pEP1446, ... 3285 bp synthetic construct QL-ELE-00-003 173 bp View
MK753225.1 nt Escherichia coli str. K-12 substr. ... 4984 bp Escherichia coli str. K-12 substr. MG1655 QL-ELE-00-003 173 bp View
MG702577.1 nt Cloning Vector pCG18.glr1, complete... 7568 bp Cloning Vector pCG18.glr1 QL-ELE-00-003 173 bp View
MN052907.1 nt Cloning vector pUbC-mNeonGreen4-tDe... 8122 bp Cloning vector pUbC-mNeonGreen4-tDeg QL-ELE-00-003 173 bp View
MN207945.1 nt Cloning vector Master_Architecture_... 5173 bp Cloning vector Master_Architecture_8916 QL-ELE-00-003 173 bp View
MN207969.1 nt Cloning vector Rep_Ogac, complete s... 4261 bp Cloning vector Rep_Ogac QL-ELE-00-003 173 bp View
MK836322.1 nt Promoter probe vector pNG1, complet... 8446 bp Promoter probe vector pNG1 QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.