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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN954066.1 nt Mus musculus targeted non-condition... 38028 bp Mus musculus QL-ELE-00-003 173 bp View
JN954073.1 nt Mus musculus targeted non-condition... 39077 bp Mus musculus QL-ELE-00-003 173 bp View
JN954080.1 nt Mus musculus targeted KO-first, con... 37973 bp Mus musculus QL-ELE-00-003 173 bp View
JN954087.1 nt Mus musculus targeted KO-first, con... 38051 bp Mus musculus QL-ELE-00-003 173 bp View
JN954094.1 nt Mus musculus targeted KO-first, con... 41095 bp Mus musculus QL-ELE-00-003 173 bp View
JN954101.1 nt Mus musculus targeted non-condition... 38019 bp Mus musculus QL-ELE-00-003 173 bp View
JN954108.1 nt Mus musculus targeted KO-first, con... 39180 bp Mus musculus QL-ELE-00-003 173 bp View
JN954115.1 nt Mus musculus targeted non-condition... 40186 bp Mus musculus QL-ELE-00-003 173 bp View
JN954122.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN954129.1 nt Mus musculus targeted KO-first, con... 38677 bp Mus musculus QL-ELE-00-003 173 bp View
JN954136.1 nt Mus musculus targeted KO-first, con... 37964 bp Mus musculus QL-ELE-00-003 173 bp View
JN954143.1 nt Mus musculus targeted KO-first, con... 39418 bp Mus musculus QL-ELE-00-003 173 bp View
JN954150.1 nt Mus musculus targeted KO-first, con... 38192 bp Mus musculus QL-ELE-00-003 173 bp View
JN954157.1 nt Mus musculus targeted non-condition... 38760 bp Mus musculus QL-ELE-00-003 173 bp View
JN954164.1 nt Mus musculus targeted non-condition... 38677 bp Mus musculus QL-ELE-00-003 173 bp View
JN954171.1 nt Mus musculus targeted KO-first, con... 37978 bp Mus musculus QL-ELE-00-003 173 bp View
JN954178.1 nt Mus musculus targeted non-condition... 38152 bp Mus musculus QL-ELE-00-003 173 bp View
JN954186.1 nt Mus musculus targeted KO-first, con... 37982 bp Mus musculus QL-ELE-00-003 173 bp View
JN954194.1 nt Mus musculus targeted KO-first, con... 36507 bp Mus musculus QL-ELE-00-003 173 bp View
JN954201.1 nt Mus musculus targeted non-condition... 36401 bp Mus musculus QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.