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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN953212.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View
JN953219.1 nt Mus musculus targeted KO-first, con... 38668 bp Mus musculus QL-ELE-00-003 173 bp View
JN953226.1 nt Mus musculus targeted non-condition... 38979 bp Mus musculus QL-ELE-00-003 173 bp View
JN953233.1 nt Mus musculus targeted non-condition... 38362 bp Mus musculus QL-ELE-00-003 173 bp View
JN953240.1 nt Mus musculus targeted non-condition... 38396 bp Mus musculus QL-ELE-00-003 173 bp View
JN953247.1 nt Mus musculus targeted non-condition... 38607 bp Mus musculus QL-ELE-00-003 173 bp View
JN953255.1 nt Mus musculus targeted KO-first, con... 39628 bp Mus musculus QL-ELE-00-003 173 bp View
JN953262.1 nt Mus musculus targeted KO-first, con... 36626 bp Mus musculus QL-ELE-00-003 173 bp View
JN953269.1 nt Mus musculus targeted KO-first, con... 38059 bp Mus musculus QL-ELE-00-003 173 bp View
JN953276.1 nt Mus musculus targeted KO-first, con... 36436 bp Mus musculus QL-ELE-00-003 173 bp View
JN953283.1 nt Mus musculus targeted non-condition... 39150 bp Mus musculus QL-ELE-00-003 173 bp View
JN953290.1 nt Mus musculus targeted KO-first, con... 39356 bp Mus musculus QL-ELE-00-003 173 bp View
JN953297.1 nt Mus musculus targeted KO-first, con... 38014 bp Mus musculus QL-ELE-00-003 173 bp View
JN953305.1 nt Mus musculus targeted KO-first, con... 40225 bp Mus musculus QL-ELE-00-003 173 bp View
JN953312.1 nt Mus musculus targeted KO-first, con... 38151 bp Mus musculus QL-ELE-00-003 173 bp View
JN953319.1 nt Mus musculus targeted non-condition... 39994 bp Mus musculus QL-ELE-00-003 173 bp View
JN953326.1 nt Mus musculus targeted non-condition... 37976 bp Mus musculus QL-ELE-00-003 173 bp View
JN953333.1 nt Mus musculus targeted non-condition... 38448 bp Mus musculus QL-ELE-00-003 173 bp View
JN953340.1 nt Mus musculus targeted KO-first, con... 37996 bp Mus musculus QL-ELE-00-003 173 bp View
JN953347.1 nt Mus musculus targeted KO-first, con... 38215 bp Mus musculus QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.