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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN952081.1 nt Mus musculus targeted non-condition... 40664 bp Mus musculus QL-ELE-00-003 173 bp View
JN952088.1 nt Mus musculus targeted KO-first, con... 38047 bp Mus musculus QL-ELE-00-003 173 bp View
JN952095.1 nt Mus musculus targeted non-condition... 39819 bp Mus musculus QL-ELE-00-003 173 bp View
JN952102.1 nt Mus musculus targeted KO-first, con... 38012 bp Mus musculus QL-ELE-00-003 173 bp View
JN952109.1 nt Mus musculus targeted non-condition... 37968 bp Mus musculus QL-ELE-00-003 173 bp View
JN952116.1 nt Mus musculus targeted non-condition... 38299 bp Mus musculus QL-ELE-00-003 173 bp View
JN952123.1 nt Mus musculus targeted KO-first, con... 39206 bp Mus musculus QL-ELE-00-003 173 bp View
JN952130.1 nt Mus musculus targeted non-condition... 39478 bp Mus musculus QL-ELE-00-003 173 bp View
JN952137.1 nt Mus musculus targeted non-condition... 38405 bp Mus musculus QL-ELE-00-003 173 bp View
JN952144.1 nt Mus musculus targeted non-condition... 37849 bp Mus musculus QL-ELE-00-003 173 bp View
JN952151.1 nt Mus musculus targeted KO-first, con... 37961 bp Mus musculus QL-ELE-00-003 173 bp View
JN952158.1 nt Mus musculus targeted KO-first, con... 37994 bp Mus musculus QL-ELE-00-003 173 bp View
JN952165.1 nt Mus musculus targeted non-condition... 40065 bp Mus musculus QL-ELE-00-003 173 bp View
JN952172.1 nt Mus musculus targeted KO-first, con... 38052 bp Mus musculus QL-ELE-00-003 173 bp View
JN952179.1 nt Mus musculus targeted non-condition... 37960 bp Mus musculus QL-ELE-00-003 173 bp View
JN952186.1 nt Mus musculus targeted non-condition... 37930 bp Mus musculus QL-ELE-00-003 173 bp View
JN952193.1 nt Mus musculus targeted non-condition... 37947 bp Mus musculus QL-ELE-00-003 173 bp View
JN952200.1 nt Mus musculus targeted KO-first, con... 37803 bp Mus musculus QL-ELE-00-003 173 bp View
JN952208.1 nt Mus musculus targeted non-condition... 38464 bp Mus musculus QL-ELE-00-003 173 bp View
JN952215.1 nt Mus musculus targeted deletion, lac... 37222 bp Mus musculus QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.