Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AF286459.1 nt Promoter probe vector pPROBE-gfp[AS... 7382 bp Promoter probe vector pPROBE-gfp[ASV] QL-ELE-00-003 173 bp View
AJ298137.1 nt Arabidopsis thaliana eIF-4A1 gene f... 11509 bp Arabidopsis thaliana QL-ELE-00-003 173 bp View
AF397196.1 nt Retrofitting vector pRetroES, compl... 6293 bp Retrofitting vector pRetroES QL-ELE-00-003 173 bp View
AF411123.1 nt Transposon vector phiMycoMarT7, com... 2068 bp Transposon vector phiMycoMarT7 QL-ELE-00-003 173 bp View
AY048714.1 nt CRIM plasmid pAH56, complete sequence. 6668 bp CRIM plasmid pAH56 QL-ELE-00-003 173 bp View
AF430344.1 nt Synthetic construct mutated HIV-1 D... 9918 bp synthetic construct QL-ELE-00-003 173 bp View
AF425297.1 nt Expression vector pGA1, complete se... 3898 bp Expression vector pGA1 QL-ELE-00-003 173 bp View
AY159024.1 nt Cloning vector pPLEX-3003, complete... 12578 bp Cloning vector pPLEX-3003 QL-ELE-00-003 173 bp View
AY181092.1 nt Synthetic construct S1 promoter-npt... 1688 bp synthetic construct QL-ELE-00-003 173 bp View
AF445080.1 nt Cloning vector pEC-K18mob2, complet... 5695 bp Cloning vector pEC-K18mob2 QL-ELE-00-003 173 bp View
AY219687.1 nt Expression vector pXK99CAT, complet... 4968 bp Expression vector pXK99CAT QL-ELE-00-003 173 bp View
AY497508.1 nt Cloning Vector psiSTRIKE Neomycin, ... 4560 bp Cloning vector psiSTRIKE Neomycin QL-ELE-00-003 173 bp View
DQ515893.1 nt HIS3/URA3 reporter vector pH3U3, co... 5834 bp HIS3/URA3 reporter vector pH3U3 QL-ELE-00-003 173 bp View
DQ835189.1 nt Transformation vector pdfd-HZ2.7 Ye... 12897 bp Transformation vector pdfd-HZ2.7 Yellow H-Pelican QL-ELE-00-003 173 bp View
DQ835190.1 nt Transformation vector pdfd-HZ2.7 Ye... 13158 bp Transformation vector pdfd-HZ2.7 Yellow HI-Pelican QL-ELE-00-003 173 bp View
EF067857.1 nt Escherichia coli plasmid E99 aminog... 618 bp Escherichia coli QL-ELE-00-003 173 bp View
EF177812.1 nt Expression vector pUNIV, complete s... 5653 bp Expression vector pUNIV QL-ELE-00-003 173 bp View
AB289764.1 nt Gateway binary vector pGWB1 DNA, co... 16385 bp Gateway binary vector pGWB1 QL-ELE-00-003 173 bp View
AB289765.1 nt Gateway binary vector pGWB2 DNA, co... 17236 bp Gateway binary vector pGWB2 QL-ELE-00-003 173 bp View
AB289766.1 nt Gateway binary vector pGWB3 DNA, co... 18275 bp Gateway binary vector pGWB3 QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.