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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HV202552.1 emblrelpat JP 2001017187-A/3: Hepatitis C viru... 8001 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
HV202553.1 emblrelpat JP 2001017187-A/4: Hepatitis C viru... 7989 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
HV202554.1 emblrelpat JP 2001017187-A/5: Hepatitis C viru... 8649 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
HV202555.1 emblrelpat JP 2001017187-A/6: Hepatitis C viru... 8001 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
HV202556.1 emblrelpat JP 2001017187-A/7: Hepatitis C viru... 11076 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
HV202557.1 emblrelpat JP 2001017187-A/8: Hepatitis C viru... 8001 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
HV202558.1 emblrelpat JP 2001017187-A/9: Hepatitis C viru... 11076 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
HV202559.1 emblrelpat JP 2001017187-A/10: Hepatitis C vir... 8001 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
HV202560.1 emblrelpat JP 2001017187-A/11: Hepatitis C vir... 11076 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
HW121695.1 emblrelpat WO 2013031956-A/14: Nucleic acid co... 7995 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
HZ385862.1 emblrelpat JP 2015522581-A/2: COMPLEXES OF CYT... 5156 bp Human betaherpesvirus 5 QL-ELE-00-003 173 bp View
HZ385863.1 emblrelpat JP 2015522581-A/3: COMPLEXES OF CYT... 4835 bp Human betaherpesvirus 5 QL-ELE-00-003 173 bp View
HZ385864.1 emblrelpat JP 2015522581-A/4: COMPLEXES OF CYT... 4964 bp Human betaherpesvirus 5 QL-ELE-00-003 173 bp View
JA662462.1 emblrelpat Sequence 17 from Patent EP2385119. 4961 bp Respiratory syncytial virus QL-ELE-00-003 173 bp View
JA662463.1 emblrelpat Sequence 18 from Patent EP2385119. 5356 bp Respiratory syncytial virus QL-ELE-00-003 173 bp View
JA662468.1 emblrelpat Sequence 23 from Patent EP2385119. 4034 bp Respiratory syncytial virus QL-ELE-00-003 173 bp View
JA662469.1 emblrelpat Sequence 24 from Patent EP2385119. 4031 bp Respiratory syncytial virus QL-ELE-00-003 173 bp View
JB980447.1 emblrelpat Sequence 25 from Patent WO2014005959. 5156 bp Human betaherpesvirus 5 QL-ELE-00-003 173 bp View
JB980448.1 emblrelpat Sequence 26 from Patent WO2014005959. 4835 bp Human betaherpesvirus 5 QL-ELE-00-003 173 bp View
JB980449.1 emblrelpat Sequence 27 from Patent WO2014005959. 4964 bp Human betaherpesvirus 5 QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.