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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
BD409965.1 emblrelpat HCV Variants. 7989 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
BD409968.1 emblrelpat HCV Variants. 7987 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
BD409970.1 emblrelpat HCV Variants. 11062 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
CQ812178.1 emblrelpat Sequence 5 from Patent EP1418185. 38306 bp adeno-associated virus 2 QL-ELE-00-003 173 bp View
CQ818355.1 emblrelpat Sequence 5 from Patent WO2004044003. 38306 bp adeno-associated virus 2 QL-ELE-00-003 173 bp View
CQ970348.1 emblrelpat Sequence 7 from Patent EP1471146. 7148 bp unidentified adenovirus QL-ELE-00-003 173 bp View
CQ970349.1 emblrelpat Sequence 8 from Patent EP1471146. 7469 bp unidentified adenovirus QL-ELE-00-003 173 bp View
CS179660.1 emblrelpat Sequence 1 from Patent WO2005095655. 7989 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
CS179661.1 emblrelpat Sequence 2 from Patent WO2005095655. 8024 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
CS179662.1 emblrelpat Sequence 3 from Patent WO2005095655. 8001 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
CS179663.1 emblrelpat Sequence 4 from Patent WO2005095655. 8649 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
CS179664.1 emblrelpat Sequence 5 from Patent WO2005095655. 8637 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
DD030813.1 emblrelpat JP 2004516039-A/1: SELF REPLICATING... 8639 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
DD030814.1 emblrelpat JP 2004516039-A/2: SELF REPLICATING... 8642 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
DD030815.1 emblrelpat JP 2004516039-A/3: SELF REPLICATING... 8643 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
DD030817.1 emblrelpat JP 2004516039-A/5: SELF REPLICATING... 8638 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
DD030818.1 emblrelpat JP 2004516039-A/6: SELF REPLICATING... 8638 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
DD030835.1 emblrelpat JP 2004516039-A/23: SELF REPLICATIN... 8638 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
DD030836.1 emblrelpat JP 2004516039-A/24: SELF REPLICATIN... 8638 bp Hepacivirus hominis QL-ELE-00-003 173 bp View
DD082374.1 emblrelpat JP 2004307477-A/1: A method to incr... 7486 bp Japanese encephalitis virus QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.