Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MW132108.1 nt Cloning vector pAChan kanamycin res... 7318 bp Cloning vector pAChan QL-ELE-00-003 173 bp View
MW132109.1 nt Cloning vector pPIsom kanamycin res... 7318 bp Cloning vector pPIsom QL-ELE-00-003 173 bp View
MW132110.1 nt Cloning vector pHyp4 kanamycin resi... 7318 bp Cloning vector pHyp4 QL-ELE-00-003 173 bp View
JN950993.1 emblreltgn Mus musculus targeted KO-first, con... 39163 bp Mus musculus QL-ELE-00-003 173 bp View
MW132111.1 nt Cloning vector pHyp5 kanamycin resi... 7318 bp Cloning vector pHyp5 QL-ELE-00-003 173 bp View
MW132112.1 nt Cloning vector pALys kanamycin resi... 7318 bp Cloning vector pALys QL-ELE-00-003 173 bp View
MW132113.1 nt Cloning vector pHyp6 kanamycin resi... 7318 bp Cloning vector pHyp6 QL-ELE-00-003 173 bp View
MW132114.1 nt Cloning vector pTonB3 kanamycin res... 7318 bp Cloning vector pTonB3 QL-ELE-00-003 173 bp View
MW132115.1 nt Cloning vector pHyp8 kanamycin resi... 7318 bp Cloning vector pHyp8 QL-ELE-00-003 173 bp View
MW132116.1 nt Cloning vector pPerox kanamycin res... 7318 bp Cloning vector pPerox QL-ELE-00-003 173 bp View
MW132117.1 nt Cloning vector pHyp9 kanamycin resi... 7318 bp Cloning vector pHyp9 QL-ELE-00-003 173 bp View
MW132119.1 nt Cloning vector pABCTrans kanamycin ... 7318 bp Cloning vector pABCTrans QL-ELE-00-003 173 bp View
MW132120.1 nt Cloning vector pCopB kanamycin resi... 7318 bp Cloning vector pCopB QL-ELE-00-003 173 bp View
MW132121.1 nt Cloning vector pHyp1s kanamycin res... 7591 bp Cloning vector pHyp1s QL-ELE-00-003 173 bp View
MW132122.1 nt Cloning vector pTonBs kanamycin res... 7597 bp Cloning vector pTonBs QL-ELE-00-003 173 bp View
MW132123.1 nt Cloning vector pHyp4s kanamycin res... 7597 bp Cloning vector pHyp4s QL-ELE-00-003 173 bp View
CP034107.1 nt Escherichia coli strain RCAD0514 pl... 123510 bp Escherichia coli QL-ELE-00-003 173 bp View
AP024115.1 nt Escherichia coli JML285 plasmid JML... 109993 bp Escherichia coli QL-ELE-00-003 173 bp View
JQ309938.1 nt Brassica napus clone TopasR right b... 1698 bp Brassica napus QL-ELE-00-003 173 bp View
JX436480.1 nt Integration vector pMD-TV, complete... 6155 bp Integration vector pMD-TV QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.