Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN948170.1 nt Mus musculus targeted non-condition... 38156 bp Mus musculus QL-ELE-00-003 173 bp View
JN948171.1 nt Mus musculus targeted non-condition... 37871 bp Mus musculus QL-ELE-00-003 173 bp View
JN948172.1 nt Mus musculus targeted non-condition... 37980 bp Mus musculus QL-ELE-00-003 173 bp View
JN948173.1 nt Mus musculus targeted non-condition... 40160 bp Mus musculus QL-ELE-00-003 173 bp View
JN948174.1 nt Mus musculus targeted KO-first, con... 38885 bp Mus musculus QL-ELE-00-003 173 bp View
JN948175.1 nt Mus musculus targeted non-condition... 37995 bp Mus musculus QL-ELE-00-003 173 bp View
JN948176.1 nt Mus musculus targeted KO-first, con... 37987 bp Mus musculus QL-ELE-00-003 173 bp View
JN948893.1 emblreltgn Mus musculus targeted non-condition... 38451 bp Mus musculus QL-ELE-00-003 173 bp View
JN948177.1 nt Mus musculus targeted KO-first, con... 37919 bp Mus musculus QL-ELE-00-003 173 bp View
JN948178.1 nt Mus musculus targeted non-condition... 38968 bp Mus musculus QL-ELE-00-003 173 bp View
JN948179.1 nt Mus musculus targeted KO-first, con... 37770 bp Mus musculus QL-ELE-00-003 173 bp View
JN948180.1 nt Mus musculus targeted non-condition... 38011 bp Mus musculus QL-ELE-00-003 173 bp View
JN948181.1 nt Mus musculus targeted KO-first, con... 38069 bp Mus musculus QL-ELE-00-003 173 bp View
JN948182.1 nt Mus musculus targeted KO-first, con... 38434 bp Mus musculus QL-ELE-00-003 173 bp View
JN948183.1 nt Mus musculus targeted non-condition... 38802 bp Mus musculus QL-ELE-00-003 173 bp View
JN948184.1 nt Mus musculus targeted KO-first, con... 38327 bp Mus musculus QL-ELE-00-003 173 bp View
JN948185.1 nt Mus musculus targeted non-condition... 38058 bp Mus musculus QL-ELE-00-003 173 bp View
JN948186.1 nt Mus musculus targeted KO-first, con... 37998 bp Mus musculus QL-ELE-00-003 173 bp View
JN948187.1 nt Mus musculus targeted KO-first, con... 38225 bp Mus musculus QL-ELE-00-003 173 bp View
JN948188.1 nt Mus musculus targeted non-condition... 38365 bp Mus musculus QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.